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A4XNQ7 (A4XNQ7_PSEMY) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Malate synthase G 1 HAMAP MF_00641
EC=2.3.3.9 HAMAP MF_00641
Gene names
Name:glcB1 HAMAP MF_00641
Ordered Locus Names:Pmen_0199
OrganismPseudomonas mendocina (strain ymp) [Complete proteome] [HAMAP] EMBL ABP82973.1
Taxonomic identifier399739 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas

Protein attributes

Sequence length725 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Acetyl-CoA + H2O + glyoxylate = (S)-malate + CoA. HAMAP MF_00641 SAAS SAAS006253

Pathway

Carbohydrate metabolism; glyoxylate cycle; (S)-malate from isocitrate: step 2/2. HAMAP MF_00641 SAAS SAAS006253

Subunit structure

Monomer By similarity. HAMAP MF_00641 SAAS SAAS006253

Subcellular location

Cytoplasm By similarity HAMAP MF_00641.

Sequence similarities

Belongs to the malate synthase family. GlcB subfamily. HAMAP MF_00641

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site3401Proton acceptor By similarity HAMAP MF_00641
Active site6331Proton donor By similarity HAMAP MF_00641

Sequences

Sequence LengthMass (Da)Tools
A4XNQ7 [UniParc].

Last modified May 29, 2007. Version 1.
Checksum: A4332CF78DEA34B0

FASTA72578,479
        10         20         30         40         50         60 
MTERVQCQRL QVAAELKQFI ESEVLPGSGV EAAAFWSGFD ALVHDLAPRN RALLAERERL 

        70         80         90        100        110        120 
QAELDAWHRA HPGPITDMSA YRAFLESIGY LLPQPEKVKV STANVDSEIA SQAGPQLVVP 

       130        140        150        160        170        180 
VMNARYALNA ANARWGSLYD ALYGTDAINE EGGASKGPGY NEVRGAKVIA FARAFLDQAA 

       190        200        210        220        230        240 
PPAQGSHADA SAYAVVAGQL QVTLSSGAQT SLAQPEKFVG FQGEAAAPSA VLLKNNGLHV 

       250        260        270        280        290        300 
EIQIDPASPI GRTDAAGVKD LLMEAALSTI MDCEDSVAAV DAADKVLVYR NWLGLMKGDL 

       310        320        330        340        350        360 
AEELDKGGKR IVRRLNADRV YTAADGSELT LHGRSLLFVR NVGHLMSNPA IIDGEGHEIP 

       370        380        390        400        410        420 
EGILDAVVTS LIALHDLKRR GNSRTGSVYI VKPKMHGPFE VAFANELFGR VEQLLGMPAN 

       430        440        450        460        470        480 
TLKMGIMDEE RRTSVNLKAC IEAASARVAF INTGFLDRTG DEMHTAMEAG AMLRKGDMKS 

       490        500        510        520        530        540 
SAWIAAYERN NVLVGLACGL RGKAQIGKGM WAMPDLMAAM LEQKIGHPKA GANTAWVPSP 

       550        560        570        580        590        600 
TAAVLHALHY HQVDVQAVQS ELERIDLASQ RDSLLGDLLS VPVSAERPWS ASDIQQELDN 

       610        620        630        640        650        660 
NCQGILGYVV RWVEQGVGCS KVPDIHNVGL MEDRATLRIS AQHIANWLHH GVVSEAQVRE 

       670        680        690        700        710        720 
TLQRMAQVVD GQNAGDPAYR PMAPNFEQSH AFRAACDLVF KGREQPSGYT EPLLHAWRLR 


FKKEA

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References

[1]"Complete sequence of Pseudomonas mendocina ymp."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Detter J.C., Bruce D., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Mikhailova N., Hersman L., Dubois J., Maurice P., Richardson P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ymp.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000680 Genomic DNA. Translation: ABP82973.1.
RefSeqYP_001185705.1. NC_009439.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGA4XNQ7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5106879.
GenomeReviewsGene locus Pmen_0199 in contig CP000680_GR.
KEGGpmy:Pmen_0199.
PATRIC19906803. VBIPseMen131592_0202.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2225.
HOGENOMHBG350005.
OMAENANWSV.
PhylomeDBA4XNQ7.
ProtClustDBPRK02999.

Enzyme and pathway databases

BioCycPMEN399739:PMEN_0199-MONOMER.

Family and domain databases

HAMAPMF_00641. Malate_synth_G.
[Tree]
InterProIPR011076. Malate_synth-like.
IPR023310. Malate_synth_G_beta_sub_dom.
IPR001465. Malate_synthase.
IPR006253. Malate_synthG.
[Graphical view]
Gene3DG3DSA:2.170.170.11. Malate_synth_G_beta_sub_dom. 2 hits.
KOK01638.
PANTHERPTHR21631:SF1. Malate_synthase. 1 hit.
PfamPF01274. Malate_synthase. 1 hit.
[Graphical view]
SUPFAMSSF51645. Malat_synth_like. 1 hit.
TIGRFAMsTIGR01345. Malate_syn_G. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA4XNQ7_PSEMY
AccessionPrimary (citable) accession number: A4XNQ7
Entry history
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: December 14, 2011
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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