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Protein

Aspartate ammonia-lyase

Gene

Pmen_0128

Organism
Pseudomonas mendocina (strain ymp)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-aspartate = fumarate + NH3.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotationImported

Enzyme and pathway databases

BioCyciPMEN399739:GHR6-127-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Aspartate ammonia-lyaseUniRule annotation (EC:4.3.1.1UniRule annotation)
Short name:
AspartaseUniRule annotation
Gene namesi
Ordered Locus Names:Pmen_0128Imported
OrganismiPseudomonas mendocina (strain ymp)Imported
Taxonomic identifieri399739 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000000229 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi399739.Pmen_0128.

Structurei

3D structure databases

ProteinModelPortaliA4XNI6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini15 – 347Lyase_1InterPro annotationAdd BLAST333
Domaini413 – 465FumaraseC_CInterPro annotationAdd BLAST53

Sequence similaritiesi

Belongs to the class-II fumarase/aspartase family. Aspartase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108IJ0. Bacteria.
COG1027. LUCA.
HOGENOMiHOG000061737.
KOiK01744.
OMAiEICENYV.
OrthoDBiPOG091H01XG.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
InterProiIPR004708. ApsA.
IPR024083. Fumarase/histidase_N.
IPR018951. Fumarase_C_C.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF10415. FumaraseC_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR00839. aspA. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A4XNI6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSAASVRVE KDLLGTLEVP ADAYYGIQTL RAVQNFRLSG VPLSHYPKLV
60 70 80 90 100
IGLAMVKQAS ADANRELGHL SAAKHTAIST ACARIIQGEF HEQFVVDMIQ
110 120 130 140 150
GGAGTSTNMN ANEVIANIAL EAMGHEKGQY QHLHPNNDVN MAQSTNDAYP
160 170 180 190 200
TAIRLGLLLG HDSLLSALDK LIQSFAAKGL EFGHVLKMGR TQLQDAVPMT
210 220 230 240 250
LGQEFRAFAT TLGEDLQHLK LLAPTLLTEV NLGGTAIGTG INADPKYQAL
260 270 280 290 300
AVKRLAIISG HPLTPAADLI EATSDMGAFV LFSGMLKRTA VKLSKICNDL
310 320 330 340 350
RLLSSGPRTG INEINLPARQ PGSSIMPGKV NPVIPEAVNQ VAFEVIGNDL
360 370 380 390 400
ALTMAAEGGQ LQLNVMEPLI AYKIFDSIRL LTRAMDMLRE LCIDGITANE
410 420 430 440 450
TRCRELMENS IGLITALNPY IGYENATRIA KVALESGRGV LELVREEQLL
460 470
DEATLADILR PENMIAPRLV PLQG
Length:474
Mass (Da):50,980
Last modified:May 29, 2007 - v1
Checksum:iE46597FECF8430C3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000680 Genomic DNA. Translation: ABP82902.1.
RefSeqiWP_011920457.1. NC_009439.1.

Genome annotation databases

EnsemblBacteriaiABP82902; ABP82902; Pmen_0128.
GeneIDi5106808.
KEGGipmy:Pmen_0128.
PATRICi19906655. VBIPseMen131592_0128.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000680 Genomic DNA. Translation: ABP82902.1.
RefSeqiWP_011920457.1. NC_009439.1.

3D structure databases

ProteinModelPortaliA4XNI6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi399739.Pmen_0128.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABP82902; ABP82902; Pmen_0128.
GeneIDi5106808.
KEGGipmy:Pmen_0128.
PATRICi19906655. VBIPseMen131592_0128.

Phylogenomic databases

eggNOGiENOG4108IJ0. Bacteria.
COG1027. LUCA.
HOGENOMiHOG000061737.
KOiK01744.
OMAiEICENYV.
OrthoDBiPOG091H01XG.

Enzyme and pathway databases

BioCyciPMEN399739:GHR6-127-MONOMER.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
InterProiIPR004708. ApsA.
IPR024083. Fumarase/histidase_N.
IPR018951. Fumarase_C_C.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF10415. FumaraseC_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR00839. aspA. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiA4XNI6_PSEMY
AccessioniPrimary (citable) accession number: A4XNI6
Entry historyi
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: September 7, 2016
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.