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Protein

Beta-xylanase

Gene

Csac_2410

Organism
Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 / Tp8T 6331)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Polysaccharide degradationUniRule annotation

Enzyme and pathway databases

BioCyciCSAC351627:GJ17-2466-MONOMER.

Protein family/group databases

CAZyiCBM22. Carbohydrate-Binding Module Family 22.
GH10. Glycoside Hydrolase Family 10.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-xylanaseUniRule annotation (EC:3.2.1.8UniRule annotation)
Gene namesi
Ordered Locus Names:Csac_2410Imported
OrganismiCaldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 / Tp8T 6331)Imported
Taxonomic identifieri351627 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacterales Family III. Incertae SedisCaldicellulosiruptor
Proteomesi
  • UP000000256 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3636Sequence analysisAdd
BLAST
Chaini37 – 700664Beta-xylanaseSequence analysisPRO_5002675670Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi351627.Csac_2410.

Structurei

3D structure databases

ProteinModelPortaliA4XM52.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini349 – 678330GH10 (glycosyl hydrolase family 10)InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the glycosyl hydrolase 10 (cellulase F) family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105D9F. Bacteria.
COG3693. LUCA.
HOGENOMiHOG000269623.
OMAiIDETQPD.
OrthoDBiEOG6B363F.

Family and domain databases

Gene3Di2.60.120.260. 2 hits.
3.20.20.80. 1 hit.
InterProiIPR003305. CenC_carb-bd.
IPR008979. Galactose-bd-like.
IPR001000. GH10.
IPR031158. GH10_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF02018. CBM_4_9. 2 hits.
PF00331. Glyco_hydro_10. 1 hit.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 2 hits.
SSF51445. SSF51445. 1 hit.
PROSITEiPS00591. GH10_1. 1 hit.
PS51760. GH10_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A4XM52-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKRTFKSVT LLAVAIVFLV SGVFLKAFPV MQNAKAQSSS VTVINFEGKD
60 70 80 90 100
TLTFFAYGNA KIATDQSSAI EGKKSIKVTN RKSIWDSLAI DVKDVLKRGK
110 120 130 140 150
TWVISSYIKH VGKKPIAFSI TALYDDGKGL KYVQLGEKIV MPSKWEKIAV
160 170 180 190 200
KWKPTLKNPS NLIIAIHPTV DKTTAYNVDS IQVMTEETYL SQAIIYKDTF
210 220 230 240 250
ENNTTNWRPR GEGVKIKLDN SKFHEGNESL YVSGRTAFWH GAKIPIIKYV
260 270 280 290 300
VPGKRYKFSI WVYHTSMDLK RFSILVQRKM ADEAQYRYDW ITSKEVAGDG
310 320 330 340 350
WEEISGSYVV PDNGKIEELE FYIESPDPTL SFWVDDFTIS DTMKLQQPNY
360 370 380 390 400
SLPSLKEKYK NDFKVGVAIG YGELINSIDK QFIKKHFNSI TPGNEMKPES
410 420 430 440 450
LLRGPDKYDF TIADAFVEFA TKNNISIRGH TLVWHNQTPD WFFKDSNGNF
460 470 480 490 500
LKKDELLKRL KKHIYTVVGR YKGKIYAWDV VNEAIDETQP DGYRRSNWYK
510 520 530 540 550
ICGPEYIEKA FIWAHEADPQ AKLFYNDYNT EVPQKRMFIY NMIKNMKSKG
560 570 580 590 600
IPIHGVGLQC HINVDSPSVE EIEETIKLFS TIPGLEIQIT ELDMSFYQWG
610 620 630 640 650
SSVYYVEPSR EMLLRQAKKY YELFNLFRKY KKIIKSVTFW GLKDDYSWLR
660 670 680 690 700
GVFNKPDFPL LFDEYYDGKP AFWALIDYSV IPQNINLPAP PAIPKLNTKK
Length:700
Mass (Da):80,853
Last modified:May 29, 2007 - v1
Checksum:i407562F85B2B5699
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000679 Genomic DNA. Translation: ABP67987.1.
RefSeqiWP_011917909.1. NC_009437.1.

Genome annotation databases

EnsemblBacteriaiABP67987; ABP67987; Csac_2410.
KEGGicsc:Csac_2410.
PATRICi21254622. VBICalSac56748_2600.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000679 Genomic DNA. Translation: ABP67987.1.
RefSeqiWP_011917909.1. NC_009437.1.

3D structure databases

ProteinModelPortaliA4XM52.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi351627.Csac_2410.

Protein family/group databases

CAZyiCBM22. Carbohydrate-Binding Module Family 22.
GH10. Glycoside Hydrolase Family 10.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABP67987; ABP67987; Csac_2410.
KEGGicsc:Csac_2410.
PATRICi21254622. VBICalSac56748_2600.

Phylogenomic databases

eggNOGiENOG4105D9F. Bacteria.
COG3693. LUCA.
HOGENOMiHOG000269623.
OMAiIDETQPD.
OrthoDBiEOG6B363F.

Enzyme and pathway databases

BioCyciCSAC351627:GJ17-2466-MONOMER.

Family and domain databases

Gene3Di2.60.120.260. 2 hits.
3.20.20.80. 1 hit.
InterProiIPR003305. CenC_carb-bd.
IPR008979. Galactose-bd-like.
IPR001000. GH10.
IPR031158. GH10_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF02018. CBM_4_9. 2 hits.
PF00331. Glyco_hydro_10. 1 hit.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 2 hits.
SSF51445. SSF51445. 1 hit.
PROSITEiPS00591. GH10_1. 1 hit.
PS51760. GH10_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43494 / DSM 8903 / Tp8T 6331Imported.

Entry informationi

Entry nameiA4XM52_CALS8
AccessioniPrimary (citable) accession number: A4XM52
Entry historyi
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: April 13, 2016
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.