A4XM50 (A4XM50_CALS8) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Endo-1,4-beta-xylanase EMBL ABP67985.1
EC=3.2.1.8 EMBL ABP67985.1

Gene names

Ordered Locus Names:

Csac_2408

Organism

Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) [Complete proteome] [HAMAP]

Taxonomic identifier

351627 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Thermoanaerobacterales › Thermoanaerobacterales Family III. Incertae Sedis › Caldicellulosiruptor

Protein attributes

Sequence length	337 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Biological process	Xylan degradation EMBL ABP67985.1
Molecular function	Glycosidase EMBL ABP67985.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro endo-1,4-beta-xylanase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A4XM50 [UniParc]. Last modified May 29, 2007. Version 1. Checksum: B266A1B3740CC108	FASTA	337	39,871
	10 20 30 40 50 60 MCENLEMLNL SLAKTYKDYF KIGAAVTAKD LEGVHRDILL KHFNSLTPEN AMKFENIHPE 70 80 90 100 110 120 EQRYNFEEVA RIKEFAIKND MKLRGHTFVW HNQTPGWVFL DKNGEEASKE LVIERLREHI 130 140 150 160 170 180 KTLCERYKDV VYAWDVVNEA VEDKTEKLLR ESNWRKIIGD DYIKIAFEIA REYAGDAKLF 190 200 210 220 230 240 YNDYNNEMPY KLEKTYKVLK ELLERGTPID GIGIQAHWNI WDKNLVSNLK KAIEVYASLG 250 260 270 280 290 300 LEIHITELDI SVFEFEDKRT DLFEPTPEML ELQAKVYEDV FAVFREYKDV ITSVTLWGIS 310 320 330 DRHTWKDNFP VKGRKDWPLL FDVNGKPKEA LYRILRF

References

[1]

"Genome sequence of the thermophilic hydrogen-producing bacterium Caldicellulosiruptor saccharolyticus DSM 8903." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Lykidis A., van de Werken H.J.G., Verhaart M.R.A., VanFossen A.L., Lewis D.L., Nichols J.D., Goorissen H.P., van Niel E.W.J., Stams F.J.M., Willquist K.U., Ward D.E., van der Oost J., Kelly R.M., Kengen S.M.W., Richardson P. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43494 / DSM 8903.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000679 Genomic DNA. Translation: ABP67985.1.
RefSeq	YP_001181176.1. NC_009437.1.
3D structure databases
ProteinModelPortal	A4XM50.
ModBase	Search...
Protein-protein interaction databases
STRING	A4XM50.
Protein family/group databases
CAZy	GH10. Glycoside Hydrolase Family 10.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5088899.
GenomeReviews	Gene locus Csac_2408 in contig CP000679_GR.
KEGG	csc:Csac_2408.
PATRIC	21254618. VBICalSac56748_2598.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3693.
HOGENOM	HBG626574.
OMA	DAFRWAH.
ProtClustDB	CLSK968360.
Family and domain databases
InterPro	IPR001000. Glyco_hydro_10. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01181.
Pfam	PF00331. Glyco_hydro_10. 1 hit. [Graphical view]
PRINTS	PR00134. GLHYDRLASE10.
SMART	SM00633. Glyco_10. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS00591. GLYCOSYL_HYDROL_F10. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A4XM50_CALS8

Accession

Primary (citable) accession number: A4XM50

Entry history

Integrated into UniProtKB/TrEMBL:	May 29, 2007
Last sequence update:	May 29, 2007
Last modified:	January 25, 2012
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)