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Protein
Submitted name:

Alanine racemase

Gene

Csac_1228

Organism
Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 / Tp8T 6331)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

IsomeraseImported

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciCSAC351627:GJ17-1257-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alanine racemaseImported (EC:5.1.1.1Imported)
Gene namesi
Ordered Locus Names:Csac_1228Imported
OrganismiCaldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 / Tp8T 6331)Imported
Taxonomic identifieri351627 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacterales Family III. Incertae SedisCaldicellulosiruptor
ProteomesiUP000000256 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi351627.Csac_1228.

Structurei

3D structure databases

ProteinModelPortaliA4XIU6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains HTH lacI-type DNA-binding domain.SAAS annotation

Phylogenomic databases

eggNOGiCOG1609.
HOGENOMiHOG000220180.
KOiK01775.
OMAiPRRLEQT.
OrthoDBiEOG6SJJMM.

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
InterProiIPR010982. Lambda_DNA-bd_dom.
IPR028082. Peripla_BP_I.
IPR000843. Tscrpt_reg_HTH_LacI.
[Graphical view]
PfamiPF00356. LacI. 1 hit.
[Graphical view]
PRINTSiPR00036. HTHLACI.
SMARTiSM00354. HTH_LACI. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
SSF53822. SSF53822. 1 hit.
PROSITEiPS00356. HTH_LACI_1. 1 hit.
PS50932. HTH_LACI_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A4XIU6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVTIKDIARE AGVSPSTVSR VLSGKAKISP ETTKRVMEAI ERLGYIPNAS
60 70 80 90 100
AKSLVMKKAY SIGLFMPRRL EQTLTSTFFD QVVSGICSYI NNTEYEIVLT
110 120 130 140 150
IVPPEKEKEN LERLIKSRKV DGFILLTSRI NDYAIKYLRS IKFPFVLIGS
160 170 180 190 200
PDRDKDYVNW VDNDNKRAGF DATEYLIKLG HTQIGFLGGM ENLVLTQDRL
210 220 230 240 250
SGYKSALNKY KLPIESQYIM FTEFDEQSSY EKAKEMLMLK NRPTAIVCID
260 270 280 290 300
EVVAYAAIKA CKELELKVGY DVSVIGFNES IFSKLSSPRL TTVNTNIFYL
310 320 330
GYYAAEMLIK ELEEPYKTYK RLIVEHSIVD GETCRAI
Length:337
Mass (Da):38,290
Last modified:May 29, 2007 - v1
Checksum:i00A985960328B3F2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000679 Genomic DNA. Translation: ABP66831.1.
RefSeqiWP_011916767.1. NC_009437.1.

Genome annotation databases

EnsemblBacteriaiABP66831; ABP66831; Csac_1228.
KEGGicsc:Csac_1228.
PATRICi21252112. VBICalSac56748_1370.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000679 Genomic DNA. Translation: ABP66831.1.
RefSeqiWP_011916767.1. NC_009437.1.

3D structure databases

ProteinModelPortaliA4XIU6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi351627.Csac_1228.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABP66831; ABP66831; Csac_1228.
KEGGicsc:Csac_1228.
PATRICi21252112. VBICalSac56748_1370.

Phylogenomic databases

eggNOGiCOG1609.
HOGENOMiHOG000220180.
KOiK01775.
OMAiPRRLEQT.
OrthoDBiEOG6SJJMM.

Enzyme and pathway databases

BioCyciCSAC351627:GJ17-1257-MONOMER.

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
InterProiIPR010982. Lambda_DNA-bd_dom.
IPR028082. Peripla_BP_I.
IPR000843. Tscrpt_reg_HTH_LacI.
[Graphical view]
PfamiPF00356. LacI. 1 hit.
[Graphical view]
PRINTSiPR00036. HTHLACI.
SMARTiSM00354. HTH_LACI. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
SSF53822. SSF53822. 1 hit.
PROSITEiPS00356. HTH_LACI_1. 1 hit.
PS50932. HTH_LACI_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43494 / DSM 8903 / Tp8T 6331Imported.

Entry informationi

Entry nameiA4XIU6_CALS8
AccessioniPrimary (citable) accession number: A4XIU6
Entry historyi
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: July 22, 2015
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.