A4XIF6 (A4XIF6_CALS8) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase, family 5 EMBL ABP66691.1

Gene names

Ordered Locus Names:

Csac_1077

Organism

Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) [Complete proteome] [HAMAP]

Taxonomic identifier

351627 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Thermoanaerobacterales › Thermoanaerobacterales Family III. Incertae Sedis › Caldicellulosiruptor

Protein attributes

Sequence length	1303 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABP66691.1
Molecular function	Hydrolase EMBL ABP66691.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 39	39	Potential EMBL ABP66691.1
	Chain	40 – 1303	1264	Potential EMBL ABP66691.1		PRO_5000239797

Sequences

	Sequence		Length	Mass (Da)
	A4XIF6 [UniParc]. Last modified May 29, 2007. Version 1. Checksum: 78152BD5B92053C0	FASTA	1,303	143,667
	10 20 30 40 50 60 MRLKTKIRKK WLSVLCTVVF LLNILFIANV TILPKVGAAT SNDGVVKIDT STLIGTNHAH 70 80 90 100 110 120 CWYRDRLDTA LRGIRSWGMN SVRVVLSNGY RWTKIPASEV ANIISLSRSL GFKAIILEVH 130 140 150 160 170 180 DTTGYGEDGA ACSLAQAVEY WKEIKSVLDG NEDFVIINIG NEPYGNNNYQ NWVNDTKNAI 190 200 210 220 230 240 KALRDAGFKH TIMVDAPNWG QDWSNTMRDN AQSIMEADPL RNLVFSIHMY GVYNTASKVE 250 260 270 280 290 300 EYIKSFVDKG LPLVIGEFGH QHTDGDPDEE AIVRYAKQYK IGLFSWSWCG NSSYVGYLDM 310 320 330 340 350 360 VNNWDPNNPT PWGQWYKTNA IGTSSTPTPT STVTPTPTPT PTPTPTVTAT PTPTPTPVST 370 380 390 400 410 420 PATSGQIKVL YANKETNSTT NTIRPWLKVV NSGSSSIDLS RVTIRYWYTV DGERAQSAIS 430 440 450 460 470 480 DWAQIGASNV TFKFVKLSSS VSGADYYLEI GFKSGAGQLQ PGKDTGEIQM RFNKDDWSNY 490 500 510 520 530 540 NQGNDWSWIQ SMTSYGENEK VTAYIDGVLV WGQEPSGATP APAPTATPTP TPTVTPTPTV 550 560 570 580 590 600 TPTPTVTATP TPTPTPTPTP VSTPATGGQI KVLYANKETN STTNTIRPWL KVVNSGSSSI 610 620 630 640 650 660 DLSRVTIRYW YTVDGERAQS AISDWAQIGA SNVTFKFVKL SSSVSGADYY LEIGFKSGAG 670 680 690 700 710 720 QLQPGKDTGE IQIRFNKSDW SNYNQGNDWS WIQSMTSYGE NEKVTAYIDG VLVWGQEPSG 730 740 750 760 770 780 TTPAPTSTPT VTVTPTPTPT PTPTPTPTVT PTPTVTPTPT VTATPTPTPT PIPTVTPLPT 790 800 810 820 830 840 ISPSPSVVEI TINTNAGRTQ ISPYIYGANQ DIEGVVHSAR RLGGNRLTGY NWENNFSNAG 850 860 870 880 890 900 NDWYHSSDDY LCWSMGISGE DAKVPAAVVS KFHEYSLKNN AYSAVTLQMA GYVSKDNYGT 910 920 930 940 950 960 VSENETAPSN RWAEVKFKKD APLSLNPDLN DNFVYMDEFI NYLINKYGMA SSPTGIKGYI 970 980 990 1000 1010 1020 LDNEPDLWAS THPRIHPNKV TCKELIEKSV ELAKVIKTLD PSAEVFGYAS YGFMGYYSLQ 1030 1040 1050 1060 1070 1080 DAPDWNQVKG EHRWFISWYL EQMKKASDSF GKRLLDVLDL HWYPEARGGN IRVCFDGEND 1090 1100 1110 1120 1130 1140 TSKEVVIARM QAPRTLWDPT YKTSVKGQIT AGENSWINQW FSDYLPIIPN VKADIEKYYP 1150 1160 1170 1180 1190 1200 GTKLAISEFD YGGRNHISGG IALADVLGIF GKYGVNFAAR WGDSGSYAAA AYNIYLNYDG 1210 1220 1230 1240 1250 1260 KGSKYGNTNV SANTSDVENM PVYASINGQD DSELHIILIN RNYDQKLQVK INITSTTKYT 1270 1280 1290 1300 KAEIYGFDSN SPDIRKMGNI DNIESNVFTL EVPNLTVYHI VLR

References

[1]

"Genome sequence of the thermophilic hydrogen-producing bacterium Caldicellulosiruptor saccharolyticus DSM 8903." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Lykidis A., van de Werken H.J.G., Verhaart M.R.A., VanFossen A.L., Lewis D.L., Nichols J.D., Goorissen H.P., van Niel E.W.J., Stams F.J.M., Willquist K.U., Ward D.E., van der Oost J., Kelly R.M., Kengen S.M.W., Richardson P. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43494 / DSM 8903.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000679 Genomic DNA. Translation: ABP66691.1.
RefSeq	YP_001179882.1. NC_009437.1.
3D structure databases
ProteinModelPortal	A4XIF6.
ModBase	Search...
Protein-protein interaction databases
STRING	A4XIF6.
Protein family/group databases
CAZy	CBM3. Carbohydrate-Binding Module Family 3. GH44. Glycoside Hydrolase Family 44. GH5. Glycoside Hydrolase Family 5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5088364.
GenomeReviews	Gene locus Csac_1077 in contig CP000679_GR.
KEGG	csc:Csac_1077.
PATRIC	21251794. VBICalSac56748_1212.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2730.
HOGENOM	HBG312533.
OMA	GENDTSK.
ProtClustDB	CLSK2472936.
Family and domain databases
InterPro	IPR008965. Carb-bd_dom. IPR001956. CBD_3. IPR001547. Glyco_hydro_5. IPR018087. Glyco_hydro_5_CS. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:2.60.40.710. CBD_3. 2 hits. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
Pfam	PF00942. CBM_3. 2 hits. PF00150. Cellulase. 1 hit. [Graphical view]
SMART	SM01067. CBM_3. 2 hits. [Graphical view]
SUPFAM	SSF49384. Cellul_bind. 2 hits. SSF51445. Glyco_hydro_cat. 2 hits.
PROSITE	PS51172. CBM3. 2 hits. PS00659. GLYCOSYL_HYDROL_F5. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A4XIF6_CALS8

Accession

Primary (citable) accession number: A4XIF6

Entry history

Integrated into UniProtKB/TrEMBL:	May 29, 2007
Last sequence update:	May 29, 2007
Last modified:	January 25, 2012
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)