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A4XHN1 (A4XHN1_CALS8) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length328 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains HTH lacI-type DNA-binding domain. SAAS SAAS028082

Sequences

Sequence LengthMass (Da)Tools
A4XHN1 [UniParc].

Last modified May 29, 2007. Version 1.
Checksum: 31892B2438FAC9D8

FASTA32836,649
        10         20         30         40         50         60 
MPSIEDVAKR AGVSKATVSR VLNNSANVSE KKRKAVLDAI KALNYTPNVT AKNLAKRKTE 

        70         80         90        100        110        120 
TVGIIIQSLS GWFYGEVVDL LNNYISKRGY GAIFCQISDN IDYFKFLVGR VDGIIVFGYK 

       130        140        150        160        170        180 
TINRESLRLL KANNVPVVLA ENNTEYSDVP RINVNNFQGG YMAAKYLIDK GCKKIAHILG 

       190        200        210        220        230        240 
PSDSFESLAR FEGYKAALSD AGIEFDGRLC IEGDFMFQKA YENIKKLVQT QQIDGIFAAN 

       250        260        270        280        290        300 
DVMAYASIYA LNEMDIKVPQ QIKVVGFDDV DIFGLRLSKM PKLTTVRQPI DLMVKTACDI 

       310        320 
LFDKINNPEK KFESEYVLDT QLVVRESA 

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References

[1]"Genome sequence of the thermophilic hydrogen-producing bacterium Caldicellulosiruptor saccharolyticus DSM 8903."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Lykidis A., van de Werken H.J.G., Verhaart M.R.A., VanFossen A.L., Lewis D.L., Nichols J.D., Goorissen H.P., van Niel E.W.J., Stams F.J.M., Willquist K.U., Ward D.E., van der Oost J., Kelly R.M., Kengen S.M.W., Richardson P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 43494 / DSM 8903.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000679 Genomic DNA. Translation: ABP66416.1.
RefSeqYP_001179607.1. NC_009437.1.

3D structure databases

ProteinModelPortalA4XHN1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING351627.Csac_0797.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABP66416; ABP66416; Csac_0797.
GeneID5086798.
KEGGcsc:Csac_0797.
PATRIC21251168. VBICalSac56748_0906.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1609.
HOGENOMHOG000220180.
KOK01775.
OMANIDYFKF.
OrthoDBEOG6SJJMM.
ProtClustDBCLSK2472777.

Enzyme and pathway databases

BioCycCSAC351627:GJ17-818-MONOMER.

Family and domain databases

Gene3D1.10.260.40. 1 hit.
InterProIPR010982. Lambda_DNA-bd_dom.
IPR028082. Peripla_BP_I.
IPR000843. Tscrpt_reg_HTH_LacI.
[Graphical view]
PfamPF00356. LacI. 1 hit.
[Graphical view]
PRINTSPR00036. HTHLACI.
SMARTSM00354. HTH_LACI. 1 hit.
[Graphical view]
SUPFAMSSF47413. SSF47413. 1 hit.
SSF53822. SSF53822. 1 hit.
PROSITEPS00356. HTH_LACI_1. 1 hit.
PS50932. HTH_LACI_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA4XHN1_CALS8
AccessionPrimary (citable) accession number: A4XHN1
Entry history
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: February 19, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)