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Protein
Submitted name:

Alanine racemase

Gene

Csac_0797

Organism
Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. alanine racemase activity Source: UniProtKB-EC
  2. DNA binding Source: UniProtKB-KW
  3. sequence-specific DNA binding transcription factor activity Source: InterPro

GO - Biological processi

  1. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseImported

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciCSAC351627:GJ17-818-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alanine racemaseImported (EC:5.1.1.1Imported)
Gene namesi
Ordered Locus Names:Csac_0797Imported
OrganismiCaldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903)Imported
Taxonomic identifieri351627 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacterales Family III. Incertae SedisCaldicellulosiruptor
ProteomesiUP000000256 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi351627.Csac_0797.

Structurei

3D structure databases

ProteinModelPortaliA4XHN1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains HTH lacI-type DNA-binding domain.SAAS annotation

Phylogenomic databases

eggNOGiCOG1609.
HOGENOMiHOG000220180.
KOiK01775.
OMAiNIDYFKF.
OrthoDBiEOG6SJJMM.

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
InterProiIPR010982. Lambda_DNA-bd_dom.
IPR028082. Peripla_BP_I.
IPR000843. Tscrpt_reg_HTH_LacI.
[Graphical view]
PfamiPF00356. LacI. 1 hit.
[Graphical view]
PRINTSiPR00036. HTHLACI.
SMARTiSM00354. HTH_LACI. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
SSF53822. SSF53822. 1 hit.
PROSITEiPS00356. HTH_LACI_1. 1 hit.
PS50932. HTH_LACI_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A4XHN1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPSIEDVAKR AGVSKATVSR VLNNSANVSE KKRKAVLDAI KALNYTPNVT
60 70 80 90 100
AKNLAKRKTE TVGIIIQSLS GWFYGEVVDL LNNYISKRGY GAIFCQISDN
110 120 130 140 150
IDYFKFLVGR VDGIIVFGYK TINRESLRLL KANNVPVVLA ENNTEYSDVP
160 170 180 190 200
RINVNNFQGG YMAAKYLIDK GCKKIAHILG PSDSFESLAR FEGYKAALSD
210 220 230 240 250
AGIEFDGRLC IEGDFMFQKA YENIKKLVQT QQIDGIFAAN DVMAYASIYA
260 270 280 290 300
LNEMDIKVPQ QIKVVGFDDV DIFGLRLSKM PKLTTVRQPI DLMVKTACDI
310 320
LFDKINNPEK KFESEYVLDT QLVVRESA
Length:328
Mass (Da):36,649
Last modified:May 28, 2007 - v1
Checksum:i31892B2438FAC9D8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000679 Genomic DNA. Translation: ABP66416.1.
RefSeqiWP_011916365.1. NC_009437.1.
YP_001179607.1. NC_009437.1.

Genome annotation databases

EnsemblBacteriaiABP66416; ABP66416; Csac_0797.
KEGGicsc:Csac_0797.
PATRICi21251168. VBICalSac56748_0906.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000679 Genomic DNA. Translation: ABP66416.1.
RefSeqiWP_011916365.1. NC_009437.1.
YP_001179607.1. NC_009437.1.

3D structure databases

ProteinModelPortaliA4XHN1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi351627.Csac_0797.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABP66416; ABP66416; Csac_0797.
KEGGicsc:Csac_0797.
PATRICi21251168. VBICalSac56748_0906.

Phylogenomic databases

eggNOGiCOG1609.
HOGENOMiHOG000220180.
KOiK01775.
OMAiNIDYFKF.
OrthoDBiEOG6SJJMM.

Enzyme and pathway databases

BioCyciCSAC351627:GJ17-818-MONOMER.

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
InterProiIPR010982. Lambda_DNA-bd_dom.
IPR028082. Peripla_BP_I.
IPR000843. Tscrpt_reg_HTH_LacI.
[Graphical view]
PfamiPF00356. LacI. 1 hit.
[Graphical view]
PRINTSiPR00036. HTHLACI.
SMARTiSM00354. HTH_LACI. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
SSF53822. SSF53822. 1 hit.
PROSITEiPS00356. HTH_LACI_1. 1 hit.
PS50932. HTH_LACI_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43494 / DSM 8903Imported.

Entry informationi

Entry nameiA4XHN1_CALS8
AccessioniPrimary (citable) accession number: A4XHN1
Entry historyi
Integrated into UniProtKB/TrEMBL: May 28, 2007
Last sequence update: May 28, 2007
Last modified: March 31, 2015
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.