A4XHF5 (A4XHF5_CALS8) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Ribulokinase HAMAP MF_00520
EC=2.7.1.16 HAMAP MF_00520

Gene names

Name:	araB HAMAP MF_00520
Ordered Locus Names:	Csac_0721

Organism

Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) [Complete proteome] [HAMAP]

Taxonomic identifier

351627 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Thermoanaerobacterales › Thermoanaerobacterales Family III. Incertae Sedis › Caldicellulosiruptor

Protein attributes

Sequence length	556 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	ATP + L(or D)-ribulose = ADP + L(or D)-ribulose 5-phosphate. HAMAP MF_00520 SAAS SAAS005929
Pathway	Carbohydrate degradation; L-arabinose degradation via L-ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route): step 2/3. HAMAP MF_00520 SAAS SAAS005929
Sequence similarities	Belongs to the ribulokinase family. HAMAP MF_00520

Ontologies

Keywords
Biological process	Arabinose catabolism HAMAP MF_00520 SAAS SAAS005929 Carbohydrate metabolism
Ligand	ATP-binding HAMAP MF_00520 SAAS SAAS005929 Nucleotide-binding
Molecular function	Kinase HAMAP MF_00520 SAAS SAAS018483 EMBL ABP66340.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	L-arabinose catabolic process Inferred from electronic annotation. Source: HAMAP
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ribulokinase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A4XHF5 [UniParc]. Last modified May 29, 2007. Version 1. Checksum: 4807F330B6066E76	FASTA	556	62,110
	10 20 30 40 50 60 MAKFSIGIDF GTQSGRAVLV NVETGEEVAT SVKEYTHGVM DESLPDGTKL PHDWALQHPQ 70 80 90 100 110 120 DYIEVLATTV PDVLKKAGVS KDDVIGIGID FTACTMLPIK KDGTPLCELP KFKSNPHAYV 130 140 150 160 170 180 KLWKHHAAQK YANRLNRIAQ ERGEKFLQRY GGKISSEWLF PKIMQILEEA PEVYEEADRF 190 200 210 220 230 240 IEAADWIVMK MTGVEKRNSC TAGYKAIWSK REGYPSKEFF KALHPRLENV VDEKLSRDIY 250 260 270 280 290 300 PIGQKAGELT QEMAKLMGLN PGTAVAIANV DAHVSVPAVG ITDIGKMLMI IGTSTCHMLL 310 320 330 340 350 360 WNEEKMVPGI CGYVEDGILP GFYGYEAGQS CVGDHFEWFV ENCVPAHYFE EAKQKGLNIY 370 380 390 400 410 420 QLLKEKAKAL KPGQSGLLAL DWWNGNRSIL VDADLTGMML GMTLTTKPEE MYRALIEATA 430 440 450 460 470 480 YGTKIIIDNF NEHGVEVREL YACGGIAEKD ELLMQIYADV TGLEIKVSAS PQTPALGSAM 490 500 510 520 530 540 FGAVAAGKEK GGYDSIFEAA KKMAKLKDYS YKPNPKNHEI YKKLYREYRI LHDYFGRGAN 550 DVMKRLKEIK EEVSRM

References

[1]

"Genome sequence of the thermophilic hydrogen-producing bacterium Caldicellulosiruptor saccharolyticus DSM 8903." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Lykidis A., van de Werken H.J.G., Verhaart M.R.A., VanFossen A.L., Lewis D.L., Nichols J.D., Goorissen H.P., van Niel E.W.J., Stams F.J.M., Willquist K.U., Ward D.E., van der Oost J., Kelly R.M., Kengen S.M.W., Richardson P. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43494 / DSM 8903.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000679 Genomic DNA. Translation: ABP66340.1.
RefSeq	YP_001179531.1. NC_009437.1.
3D structure databases
ProteinModelPortal	A4XHF5.
ModBase	Search...
Protein-protein interaction databases
STRING	A4XHF5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5087380.
GenomeReviews	Gene locus Csac_0721 in contig CP000679_GR.
KEGG	csc:Csac_0721.
PATRIC	21251008. VBICalSac56748_0827.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1069.
HOGENOM	HBG312681.
OMA	YEAGQSC.
ProtClustDB	PRK04123.
Family and domain databases
HAMAP	MF_00520. Ribulokinase. [Tree]
InterPro	IPR000577. Carb_kinase_FGGY. IPR018485. Carb_kinase_FGGY_C. IPR018483. Carb_kinase_FGGY_CS. IPR018484. Carb_kinase_FGGY_N. IPR005929. L_ribulokin. [Graphical view]
KO	K00853.
PANTHER	PTHR10196. FGGY_kin. 1 hit.
Pfam	PF02782. FGGY_C. 1 hit. PF00370. FGGY_N. 1 hit. [Graphical view]
TIGRFAMs	TIGR01234. L-ribulokinase. 1 hit.
PROSITE	PS00445. FGGY_KINASES_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A4XHF5_CALS8

Accession

Primary (citable) accession number: A4XHF5

Entry history

Integrated into UniProtKB/TrEMBL:	May 29, 2007
Last sequence update:	May 29, 2007
Last modified:	January 25, 2012
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)