A4XGN0 (A4XGN0_CALS8) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha amylase, catalytic region containing protein EMBL ABP66065.1

Gene names

Ordered Locus Names:

Csac_0426

Organism

Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) [Complete proteome] [HAMAP]

Taxonomic identifier

351627 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Thermoanaerobacterales › Thermoanaerobacterales Family III. Incertae Sedis › Caldicellulosiruptor

Protein attributes

Sequence length	576 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A4XGN0 [UniParc]. Last modified May 29, 2007. Version 1. Checksum: 8DCC4984F02DC80F	FASTA	576	67,882
	10 20 30 40 50 60 MQVIHNQVHD IFALSKNRFY VKLWVQRGFA KNVTLIFSDR YDLDVQKVKM DFYMNVGNFE 70 80 90 100 110 120 VYTAQVQNKT PRFAYKFLIE LLDGSFKVFN QFGLLDTEEN LYFDAFQFPY ANEADMFEKP 130 140 150 160 170 180 SFTEGLVVYE IFPDRFKRGK KEVHSKKLFD WDYCSWDVPG SEVFLGGDFA GIKEKIEYFK 190 200 210 220 230 240 ALGINAIYLT PIFKSLSSHR YNVDDYFDVD PLLGTKEEFK ELVDSLHENG IRIILDMVFN 250 260 270 280 290 300 HTGVGFFAFQ DVIKNGENSK YYSWYNIKSL PVDIQKGNYE TFATNVKSMP RINTSNKEVQ 310 320 330 340 350 360 DFFLEVLKYW LLEFDVDGFR FDVANELDKN FIRRIRNELK SIKKDILLIG EVMHRSENFL 370 380 390 400 410 420 MGDMFDGVMN YFSWEVFARY LMGKYDAEDA SRILADYRLK FNPVLFSCQL NLIGSHDTER 430 440 450 460 470 480 VLTRLGNRKL AMLAAVYNLT YQGIPMIYYG DEIGMEGGHD PDCRRGMIWE EEKQDKEIFD 490 500 510 520 530 540 LYRRLIDLKK TSSALNSDNI REFSIGDVLC FERKSESEIV YVLFNPRKAL QKIRLWSEFI 550 560 570 VNREIEFFST QQKIKNYSCY IEVELSPESF EIVVVK

References

[1]

"Genome sequence of the thermophilic hydrogen-producing bacterium Caldicellulosiruptor saccharolyticus DSM 8903." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Lykidis A., van de Werken H.J.G., Verhaart M.R.A., VanFossen A.L., Lewis D.L., Nichols J.D., Goorissen H.P., van Niel E.W.J., Stams F.J.M., Willquist K.U., Ward D.E., van der Oost J., Kelly R.M., Kengen S.M.W., Richardson P. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43494 / DSM 8903.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000679 Genomic DNA. Translation: ABP66065.1.
RefSeq	YP_001179256.1. NC_009437.1.
3D structure databases
ProteinModelPortal	A4XGN0.
ModBase	Search...
Protein-protein interaction databases
STRING	A4XGN0.
Protein family/group databases
CAZy	GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5086948.
GenomeReviews	Gene locus Csac_0426 in contig CP000679_GR.
KEGG	csc:Csac_0426.
PATRIC	21250325. VBICalSac56748_0495.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0366.
HOGENOM	HBG726713.
OMA	ETVWYQI.
ProtClustDB	CLSK2472659.
Family and domain databases
InterPro	IPR015902. Alpha_amylase. IPR006047. Glyco_hydro_13_cat_dom. IPR004185. Glyco_hydro_13_lg-like_dom. IPR006589. Glyco_hydro_13_sub_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. IPR014756. Ig_E-set. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. PF02903. Alpha-amylase_N. 1 hit. [Graphical view]
SMART	SM00642. Aamy. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit. SSF81296. Ig_E-set. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A4XGN0_CALS8

Accession

Primary (citable) accession number: A4XGN0

Entry history

Integrated into UniProtKB/TrEMBL:	May 29, 2007
Last sequence update:	May 29, 2007
Last modified:	January 25, 2012
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)