Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Ribose/galactose isomerase

Gene

Saro_3514

Organism
Novosphingobium aromaticivorans (strain ATCC 700278 / DSM 12444 / CIP 105152 / NBRC 16084 / F199)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

IsomeraseImported

Enzyme and pathway databases

BioCyciNARO279238:GHBU-3525-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribose/galactose isomeraseImported
Gene namesi
Ordered Locus Names:Saro_3514Imported
Encoded oniPlasmid pNL2Imported
OrganismiNovosphingobium aromaticivorans (strain ATCC 700278 / DSM 12444 / CIP 105152 / NBRC 16084 / F199)Imported
Taxonomic identifieri279238 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeNovosphingobium
Proteomesi
  • UP000009134 Componenti: Plasmid pNL2

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3C5YX-ray1.81A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P1-212[»]
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiA4XEL3.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini164 – 21047DUF3666InterPro annotationAdd
BLAST

Phylogenomic databases

HOGENOMiHOG000219532.
OMAiFGQINDG.
OrthoDBiPOG091H0JH0.

Family and domain databases

Gene3Di3.40.1400.10. 1 hit.
InterProiIPR022133. Ribose_5_isomerase_C.
IPR003500. RpiB_LacA_LacB.
[Graphical view]
PANTHERiPTHR30345. PTHR30345. 1 hit.
PfamiPF12408. DUF3666. 1 hit.
PF02502. LacAB_rpiB. 1 hit.
[Graphical view]
SUPFAMiSSF89623. SSF89623. 1 hit.

Sequencei

Sequence statusi: Complete.

A4XEL3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKIALIIENS QAAKNAVVHE ALTTVAEPLG HKVFNYGMYT AEDKASLTYV
60 70 80 90 100
MNGLLAGILL NSGAADFVVT GCGTGMGSML AANAMPGVFC GLVIDPTDAF
110 120 130 140 150
LFGQINDGNA ISMPYSKGFG WAAELNLQDV YRKLFDGERG LGYPRERAEI
160 170 180 190 200
MRKNRGILRE LKDASCRDML TVLKTVDQDL LRAAIAGEKF AELFYPNCKD
210
DAIANYLRSL DA
Length:212
Mass (Da):22,986
Last modified:May 29, 2007 - v1
Checksum:i3A5385F2080E8A02
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000677 Genomic DNA. Translation: ABP64374.1.
RefSeqiWP_011906761.1. NC_009427.1.

Genome annotation databases

EnsemblBacteriaiABP64374; ABP64374; Saro_3514.
KEGGinar:Saro_3514.
PATRICi22790156. VBINovAro50627_3728.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000677 Genomic DNA. Translation: ABP64374.1.
RefSeqiWP_011906761.1. NC_009427.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3C5YX-ray1.81A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P1-212[»]
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABP64374; ABP64374; Saro_3514.
KEGGinar:Saro_3514.
PATRICi22790156. VBINovAro50627_3728.

Phylogenomic databases

HOGENOMiHOG000219532.
OMAiFGQINDG.
OrthoDBiPOG091H0JH0.

Enzyme and pathway databases

BioCyciNARO279238:GHBU-3525-MONOMER.

Miscellaneous databases

EvolutionaryTraceiA4XEL3.

Family and domain databases

Gene3Di3.40.1400.10. 1 hit.
InterProiIPR022133. Ribose_5_isomerase_C.
IPR003500. RpiB_LacA_LacB.
[Graphical view]
PANTHERiPTHR30345. PTHR30345. 1 hit.
PfamiPF12408. DUF3666. 1 hit.
PF02502. LacAB_rpiB. 1 hit.
[Graphical view]
SUPFAMiSSF89623. SSF89623. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiA4XEL3_NOVAD
AccessioniPrimary (citable) accession number: A4XEL3
Entry historyi
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: September 7, 2016
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, PlasmidImported, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.