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Protein
Submitted name:

Cupin 2, conserved barrel domain protein

Gene

Saro_3421

Organism
Novosphingobium aromaticivorans (strain ATCC 700278 / DSM 12444 / CIP 105152 / NBRC 16084 / F199)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciNARO279238:GHBU-3418-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Cupin 2, conserved barrel domain proteinImported
Gene namesi
Ordered Locus Names:Saro_3421Imported
Encoded oniPlasmid pNL2Imported
OrganismiNovosphingobium aromaticivorans (strain ATCC 700278 / DSM 12444 / CIP 105152 / NBRC 16084 / F199)Imported
Taxonomic identifieri279238 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeNovosphingobium
Proteomesi
  • UP000009134 Componenti: Plasmid pNL2

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3ES1X-ray1.91A1-171[»]
ProteinModelPortaliA4XEC0.
SMRiA4XEC0.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiA4XEC0.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini82 – 148Cupin_2InterPro annotationAdd BLAST67

Phylogenomic databases

HOGENOMiHOG000178752.
OMAiGASNEAR.
OrthoDBiPOG091H0SHJ.

Family and domain databases

Gene3Di2.60.120.10. 1 hit.
InterProiIPR013096. Cupin_2.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]
PfamiPF07883. Cupin_2. 1 hit.
[Graphical view]
SUPFAMiSSF51182. SSF51182. 1 hit.

Sequencei

Sequence statusi: Complete.

A4XEC0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSEALSDSGL PPVQRVVTGH DAHGRAVFKS EDVTPTRMIP SGDASFLLVW
60 70 80 90 100
TTATVPADNN DETDGRQREA GLTLDGGSVI RVVDMLPGKE SPMHRTNSID
110 120 130 140 150
YGIVLEGEIE LELDDGAKRT VRQGGIIVQR GTNHLWRNTT DKPCRIAFIL
160 170
IEAPAYLHNG QPLPEDKPDH K
Length:171
Mass (Da):18,687
Last modified:May 29, 2007 - v1
Checksum:i70409CAEC82817B7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000677 Genomic DNA. Translation: ABP64281.1.
RefSeqiWP_011906668.1. NC_009427.1.

Genome annotation databases

EnsemblBacteriaiABP64281; ABP64281; Saro_3421.
KEGGinar:Saro_3421.
PATRICi22789964. VBINovAro50627_3632.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000677 Genomic DNA. Translation: ABP64281.1.
RefSeqiWP_011906668.1. NC_009427.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3ES1X-ray1.91A1-171[»]
ProteinModelPortaliA4XEC0.
SMRiA4XEC0.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABP64281; ABP64281; Saro_3421.
KEGGinar:Saro_3421.
PATRICi22789964. VBINovAro50627_3632.

Phylogenomic databases

HOGENOMiHOG000178752.
OMAiGASNEAR.
OrthoDBiPOG091H0SHJ.

Enzyme and pathway databases

BioCyciNARO279238:GHBU-3418-MONOMER.

Miscellaneous databases

EvolutionaryTraceiA4XEC0.

Family and domain databases

Gene3Di2.60.120.10. 1 hit.
InterProiIPR013096. Cupin_2.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]
PfamiPF07883. Cupin_2. 1 hit.
[Graphical view]
SUPFAMiSSF51182. SSF51182. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiA4XEC0_NOVAD
AccessioniPrimary (citable) accession number: A4XEC0
Entry historyi
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: November 2, 2016
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, PlasmidImported, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.