A4XDU4 (A4XDU4_NOVAD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Aromatic-ring-hydroxylating dioxygenase, beta subunit EMBL ABP64105.1

Gene names

Ordered Locus Names:

Saro_3860

Encoded on

Plasmid pNL1 EMBL ABP64105.1

Organism

Novosphingobium aromaticivorans (strain DSM 12444) [Complete proteome] [HAMAP]

Taxonomic identifier

279238 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Sphingomonadales › Sphingomonadaceae › Novosphingobium

Protein attributes

Sequence length	162 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Molecular function	Dioxygenase EMBL ABP64105.1 Oxidoreductase
Technical term	3D-structure PDB 3EBY Complete proteome Plasmid EMBL ABP64105.1
Gene Ontology (GO)
Biological process	cellular aromatic compound metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A4XDU4 [UniParc]. Last modified May 29, 2007. Version 1. Checksum: 540760743C1BF932	FASTA	162	17,898
	10 20 30 40 50 60 MSVAAEVAQV AQSAIDDFNA AYGLCLDDDR LEQWPTLFVD DCLYQVIARE NVDNGLPAAV 70 80 90 100 110 120 MYCDSKGMLA DRVVALRKAN VFPEHFNRHL IGRAVITGVE GDQVSAEASY VVFQTRNDGE 130 140 150 160 TRIYNAGKYV DRFDLSGGTV RLKSRTCIYD TLRIATLLAT PI

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete sequence of plasmid pNL1 of Novosphingobium aromaticivorans DSM 12444." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Han C., Thomson S., Schmutz J., Larimer F., Land M., Kyrpides N. , Ivanova N., Fredrickson J., Romine M.F., Richardson P. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 12444.
[2]	"Crystal structure of the beta subunit of a putative aromatic-ring-hydroxylating dioxygenase (YP_001165631.1) from NOVOSPHINGOBIUM AROMATICIVORANS DSM 12444 at 1.75 A resolution." Joint Center for Structural Genomics (JCSG) Submitted (AUG-2008) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (1.75 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

CP000676 Genomic DNA. Translation: ABP64105.1.

RefSeq

YP_001165631.1. NC_009426.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3EBY	X-ray	1.75	A	1-162	[»]

ProteinModelPortal

A4XDU4.

ModBase

Search...

Protein-protein interaction databases

STRING

A4XDU4.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

GeneID

5077471.

GenomeReviews

Gene locus Saro_3860 in contig CP000676_GR.

KEGG

nar:Saro_3860.

PATRIC

22789617. VBINovAro50627_3459.

Organism-specific databases

CMR

Search...

Phylogenomic databases

eggNOG

COG5517.

HOGENOM

HBG436845.

OMA

ITARENA.

ProtClustDB

CLSK782466.

Family and domain databases

InterPro

IPR000391. Rng_hydr_dOase-bsu.
[Graphical view]

KO

K05709.

Pfam

PF00866. Ring_hydroxyl_B. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

A4XDU4_NOVAD

Accession

Primary (citable) accession number: A4XDU4

Entry history

Integrated into UniProtKB/TrEMBL:	May 29, 2007
Last sequence update:	May 29, 2007
Last modified:	December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)