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A4XDS3 (A4XDS3_NOVAD) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Saro_3838 EMBL ABP64084.1
Encoded onPlasmid pNL1 EMBL ABP64084.1
OrganismNovosphingobium aromaticivorans (strain DSM 12444) [Complete proteome] [HAMAP] EMBL ABP64084.1
Taxonomic identifier279238 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeNovosphingobium

Protein attributes

Sequence length408 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
A4XDS3 [UniParc].

Last modified May 29, 2007. Version 1.
Checksum: 9AC283F1A0F26122

FASTA40844,158
        10         20         30         40         50         60 
MKSIAVVGAN LAGGRAVESL RQAGFDGRIT LIGEEPWRPY ERPPLSKEVL WDPANVPDNF 

        70         80         90        100        110        120 
FLHDEAWYAA NRIEMRLGTR AEALDLAASA VRLTGGDLVQ ADRILLTTGG SARKLNMEGA 

       130        140        150        160        170        180 
DAANVHYLRT RDDATRMATD LRDGARIVII GMGVIGAEVA ASAVKLGCRV TAIEPLAAPM 

       190        200        210        220        230        240 
IRALGPQFGQ WLGEEHRQRG VDTRFGRGVN AMKVLDGRVT QVELDDGSLV DCDAVVVGVG 

       250        260        270        280        290        300 
IVPEISLARD AGIVTNNGII VDRQCRTSNE NVFAAGDVAE QDSFFGGHIR QETYQNAADQ 

       310        320        330        340        350        360 
AQAAALAMLG QDVDYCKPVW YWSDQFDLNI QFCGHIPVQA EVTLRGDMAS NQFTAFFRSG 

       370        380        390        400 
ETIEGILTVN RAPDMGIGKR LIERRARAQA AQLADADVSL REILKQAG 

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References

[1]"Complete sequence of plasmid pNL1 of Novosphingobium aromaticivorans DSM 12444."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Han C., Thomson S., Schmutz J., Larimer F., Land M., Kyrpides N. expand/collapse author list , Ivanova N., Fredrickson J., Romine M.F., Richardson P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 12444 EMBL ABP64084.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000676 Genomic DNA. Translation: ABP64084.1.
RefSeqYP_001165610.1. NC_009426.1.

3D structure databases

ProteinModelPortalA4XDS3.
ModBaseSearch...

Protein-protein interaction databases

STRING279238.Saro_3838.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABP64084; ABP64084; Saro_3838.
GeneID5077449.
KEGGnar:Saro_3838.
PATRIC22789569. VBINovAro50627_3435.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0446.
HOGENOMHOG000276711.
KOK00529.
OMASCELGAN.
ProtClustDBCLSK782448.

Enzyme and pathway databases

BioCycNARO279238:GHBU-438-MONOMER.

Family and domain databases

Gene3D3.30.390.30. 1 hit.
InterProIPR016156. FAD/NAD-linked_Rdtase_dimer.
IPR013027. FAD_pyr_nucl-diS_OxRdtase.
IPR004099. Pyr_nucl-diS_OxRdtase_dimer.
IPR023753. Pyr_nucl-diS_OxRdtase_FAD/NAD.
IPR001327. Pyr_OxRdtase_NAD-bd_dom.
[Graphical view]
PfamPF00070. Pyr_redox. 1 hit.
PF07992. Pyr_redox_2. 1 hit.
[Graphical view]
PRINTSPR00368. FADPNR.
SUPFAMSSF55424. FAD/NAD-linked_reductase_dimer. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA4XDS3_NOVAD
AccessionPrimary (citable) accession number: A4XDS3
Entry history
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: May 1, 2013
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)