A4XDP8 (A4XDP8_SALTO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ricin B lectin EMBL ABP55380.1

Gene names

Ordered Locus Names:

Strop_2942

Organism

Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) [Complete proteome] [HAMAP] EMBL ABP55380.1

Taxonomic identifier

369723 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micromonosporineae › Micromonosporaceae › Salinispora

Protein attributes

Sequence length	488 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Ligand	Lectin EMBL ABP55380.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	proteolysis Inferred from electronic annotation. Source: InterPro
Cellular component	extracellular region Inferred from electronic annotation. Source: InterPro
Molecular function	serine-type endopeptidase activity Inferred from electronic annotation. Source: InterPro sugar binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A4XDP8 [UniParc]. Last modified May 29, 2007. Version 1. Checksum: 1623459F5DBF8AF5	FASTA	488	49,979
	10 20 30 40 50 60 MGASAASETP ATPAAAEPAV VPADQLDALR RDLGLSAEEL ATRLAVEATA SSIEPRMRAA 70 80 90 100 110 120 LAEAYAGTWV TADGRTTVVG LTDPARADQV RAAGVEPRIV ARSLAELRQL TTKLDRRATV 130 140 150 160 170 180 AGTAVHAWHI ALPSNTVSIQ ASNAAAATTF ARAAGLPDDA VSVVVGADAY RPVYDIRGGD 190 200 210 220 230 240 QFVINSRLIC SVGFAVAGGF VTAGHCGNVG EPTTGSGAAQ GVIRGSSFPD DDLAWVETNA 250 260 270 280 290 300 SWIPRPWVST YDGNVVTVTG SQEAAVGAAV CRSGRTTGWK CGTITAKNVT VNYSAGPVYG 310 320 330 340 350 360 MVRSTACAQP GDSGGSFVAG SQAQGVTSGG SGNCSTGGST VYQPVNEILS RYGLSLTTSG 370 380 390 400 410 420 GGSTSRIIGY ASKCVDVPGA NGVDGQYLHL WHCNGTNAQD WTFPGDGTIR AFGLCMDVAW 430 440 450 460 470 480 GSVDNGAVVQ LAHCSGNPAQ QWVLTSADEL VNPQANKCLD VQDGNSADGA RLQTYQCHGG ANQKWRLG

References

[1]

"Complete sequence of Salinispora tropica CNB-440." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Sun H., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Jensen P.R., Moore B.S., Udwary D.W., Richardson P. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000667 Genomic DNA. Translation: ABP55380.1.
RefSeq	YP_001159758.1. NC_009380.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A4XDP8.
Protein family/group databases
CAZy	CBM13. Carbohydrate-Binding Module Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5059406.
GenomeReviews	Gene locus Strop_2942 in contig CP000667_GR.
KEGG	stp:Strop_2942.
PATRIC	23444978. VBISalTro43511_3030.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG136653.
HOGENOM	HBG696007.
OMA	GAPICKS.
ProtClustDB	CLSK2530190.
Enzyme and pathway databases
BioCyc	STRO369723:STROP_2942-MONOMER.
Family and domain databases
InterPro	IPR009003. Pept_cys/ser_Trypsin-like. IPR004236. Pept_S1_alpha_lytic. IPR001316. Pept_S1A_streptogrisin. IPR018114. Peptidase_S1/S6_AS. IPR001254. Peptidase_S1_S6. IPR008997. Ricin_B-rel_lectin. IPR000772. Ricin_B_lectin. [Graphical view]
Pfam	PF02983. Pro_Al_protease. 1 hit. PF00652. Ricin_B_lectin. 1 hit. [Graphical view]
PRINTS	PR00861. ALYTICPTASE.
SMART	SM00458. RICIN. 1 hit. SM00020. Tryp_SPc. 1 hit. [Graphical view]
SUPFAM	SSF50494. Pept_Ser_Cys. 1 hit. SSF50370. RicinB_like. 1 hit.
PROSITE	PS50231. RICIN_B_LECTIN. 1 hit. PS00135. TRYPSIN_SER. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A4XDP8_SALTO

Accession

Primary (citable) accession number: A4XDP8

Entry history

Integrated into UniProtKB/TrEMBL:	May 29, 2007
Last sequence update:	May 29, 2007
Last modified:	December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)