A4XD26 (A4XD26_SALTO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Chitinase EMBL ABP56833.1
EC=3.2.1.14 EMBL ABP56833.1

Gene names

Ordered Locus Names:

Strop_4405

Organism

Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) [Complete proteome] [HAMAP] EMBL ABP56833.1

Taxonomic identifier

369723 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micromonosporineae › Micromonosporaceae › Salinispora

Protein attributes

Sequence length	353 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABP56833.1
Molecular function	Glycosidase EMBL ABP56833.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro chitin catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	extracellular region Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro chitinase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 31	31	Potential EMBL ABP56833.1
	Chain	32 – 353	322	Potential EMBL ABP56833.1		PRO_5000239558

Sequences

	Sequence		Length	Mass (Da)
	A4XD26 [UniParc]. Last modified May 29, 2007. Version 1. Checksum: E8494B26F2793D4E	FASTA	353	37,802
	10 20 30 40 50 60 MSRLRALAAL AVLTIAGTLM AIIPAATASA ATCATSWHSS AVYTGGMQVS HNGRNYQAKW 70 80 90 100 110 120 WTQNEAPPGT SGVWQDLGAC GGSTPPPGGT CNHPNWVAGT WYPAGSVVRY TNGLYYIAEH 130 140 150 160 170 180 DNPGYDPTIS TWYWDPYSCG SPPPTDPGDF VVTEAQFNQM FPGRNSFYTY AGLVAALNAY 190 200 210 220 230 240 PAFTNTGNST VRRQEAAAFL ANVHHETGGL IHIVEQNPAN YPHYCDSGQP YGCPAGQAAY 250 260 270 280 290 300 YGRGPIQLSW NFNYNAAGNA LGLPLLTNPW LVENDAAVAW KTALWYWMTQ NGPGWMTAHS 310 320 330 340 350 AMVNGAGFGE TIRSINGSLE CNGGNPAQVQ SRVNRYQQFA GLLGVPPGAN LYC

References

[1]

"Complete sequence of Salinispora tropica CNB-440." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Sun H., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Jensen P.R., Moore B.S., Udwary D.W., Richardson P. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000667 Genomic DNA. Translation: ABP56833.1.
RefSeq	YP_001161211.1. NC_009380.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A4XD26.
Protein family/group databases
CAZy	CBM12. Carbohydrate-Binding Module Family 12. CBM5. Carbohydrate-Binding Module Family 5. GH19. Glycoside Hydrolase Family 19.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5060891.
GenomeReviews	Gene locus Strop_4405 in contig CP000667_GR.
KEGG	stp:Strop_4405.
PATRIC	23448072. VBISalTro43511_4556.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3979.
HOGENOM	HBG748705.
OMA	DPVISTW.
ProtClustDB	CLSK2537435.
Enzyme and pathway databases
BioCyc	STRO369723:STROP_4405-MONOMER.
Family and domain databases
InterPro	IPR003610. CBM_fam5/12. IPR016283. Glyco_hydro_19. IPR000726. Glyco_hydro_19_cat. IPR023346. Lysozyme-like_dom. [Graphical view]
Gene3D	G3DSA:2.10.10.20. G3DSA:2.10.10.20. 1 hit.
KO	K01183.
Pfam	PF02839. CBM_5_12. 1 hit. PF00182. Glyco_hydro_19. 1 hit. [Graphical view]
PIRSF	PIRSF001060. Endochitinase. 1 hit.
SMART	SM00495. ChtBD3. 2 hits. [Graphical view]
SUPFAM	SSF51055. CBM_5_12. 1 hit. SSF53955. SSF53955. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A4XD26_SALTO

Accession

Primary (citable) accession number: A4XD26

Entry history

Integrated into UniProtKB/TrEMBL:	May 29, 2007
Last sequence update:	May 29, 2007
Last modified:	December 14, 2011
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)