Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Glutamate decarboxylase

Gene

Strop_4374

Organism
Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciSTRO369723:GI49-4431-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Ordered Locus Names:Strop_4374Imported
OrganismiSalinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)Imported
Taxonomic identifieri369723 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicromonosporalesMicromonosporaceaeSalinispora
ProteomesiUP000000235 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi369723.Strop_4374.

Structurei

3D structure databases

ProteinModelPortaliA4XCZ5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000070228.
KOiK01580.
OMAiFVGTWMD.
OrthoDBiEOG6TFCPW.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

A4XCZ5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNTRRPVDS AEADVVEVNP LFARPGESTE LARFSIPDCE SLPETAYQIV
60 70 80 90 100
HDEVALDGNA RLNLATFVGT WMDSHAEKLY ADTFDKNLID KDEYKATDAI
110 120 130 140 150
EERCRIILAD LWHAPEPRNT IGASTIGSSE ACMLGGLALK RRWQHARRSV
160 170 180 190 200
GKSSERPNLV MSSAVQVCWK KFCSYWDVEA RIVSISEERK VLDGHDLRSY
210 220 230 240 250
VDENTIGVVA VFGVTYTGMY EPVERIAAAL DEIQASKGLD IPIHVDGATG
260 270 280 290 300
AFVAPFIQPH ITWDFRISRV ASINVSSHKY GLVYPGLGWI VWRDQAALPE
310 320 330 340 350
DLRFRVAYLG GETPTVGLSF TRPGAQVLLQ YYLFLRLGRD GYQRVHQATQ
360 370 380 390 400
DVAQYLSREI AKMPQFELWS DGSDLPVLTW HLRKGRSYNW NQYHLSDRLR
410 420 430 440 450
MKGWQVPTYP MPDDLTHLTV QRIVVRGGLS RDLAGALVAD LHAEVGFLES
460
LTAPIEALGE RPGFHH
Length:466
Mass (Da):52,323
Last modified:May 29, 2007 - v1
Checksum:i17ACC971307797E9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000667 Genomic DNA. Translation: ABP56802.1.
RefSeqiWP_012015566.1. NC_009380.1.
YP_001161180.1. NC_009380.1.

Genome annotation databases

EnsemblBacteriaiABP56802; ABP56802; Strop_4374.
GeneIDi5060860.
KEGGistp:Strop_4374.
PATRICi23448014. VBISalTro43511_4527.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000667 Genomic DNA. Translation: ABP56802.1.
RefSeqiWP_012015566.1. NC_009380.1.
YP_001161180.1. NC_009380.1.

3D structure databases

ProteinModelPortaliA4XCZ5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi369723.Strop_4374.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABP56802; ABP56802; Strop_4374.
GeneIDi5060860.
KEGGistp:Strop_4374.
PATRICi23448014. VBISalTro43511_4527.

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000070228.
KOiK01580.
OMAiFVGTWMD.
OrthoDBiEOG6TFCPW.

Enzyme and pathway databases

BioCyciSTRO369723:GI49-4431-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Salinispora tropica CNB-440."
    Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Sun H., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Jensen P.R., Moore B.S., Udwary D.W., Richardson P.
    Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-916 / DSM 44818 / CNB-440Imported.

Entry informationi

Entry nameiA4XCZ5_SALTO
AccessioniPrimary (citable) accession number: A4XCZ5
Entry historyi
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: June 24, 2015
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.