Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

A4XBU1

- A4XBU1_SALTO

UniProt

A4XBU1 - A4XBU1_SALTO

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Strop_3968

Organism
Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 47 (01 Oct 2014)
      Sequence version 1 (29 May 2007)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSTRO369723:GI49-4020-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Strop_3968Imported
    OrganismiSalinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)Imported
    Taxonomic identifieri369723 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeSalinispora
    ProteomesiUP000000235: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi369723.Strop_3968.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiVEVKYGQ.
    OrthoDBiEOG661H49.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A4XBU1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPGVPPKPML ATTGELPAGA GWAYEFKWDG IRALVNIGDG QHRVYARSGV    50
    QVTVAYPELA GLPAQVDDVL LDGEVVLFGE TGQPSFTALA ERMHVRDRGR 100
    AARLAASLPI TYLVFDLLRL DGIDLTGYSW QRRRAVLDEL GLAGPRWAVP 150
    PAFTDGPATL QAAGEHGLEG VMAKRVGSVY RPGTRSPDWV KVKLEVTGDF 200
    VVGGWRPGAR RLGGLLVGVP RSDGRLAYRG RVGGGIGAAL ERELLRELEP 250
    LRTGASPFVG DLPREDTRAV VWVAPRVVVE VKYGQLTPDG RLRFPRVLRL 300
    RPDKLAEEVD DV 312
    Length:312
    Mass (Da):33,835
    Last modified:May 29, 2007 - v1
    Checksum:iA8B9C08B77C66444
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000667 Genomic DNA. Translation: ABP56398.1.
    RefSeqiWP_012015166.1. NC_009380.1.
    YP_001160776.1. NC_009380.1.

    Genome annotation databases

    EnsemblBacteriaiABP56398; ABP56398; Strop_3968.
    GeneIDi5060449.
    KEGGistp:Strop_3968.
    PATRICi23447144. VBISalTro43511_4097.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000667 Genomic DNA. Translation: ABP56398.1 .
    RefSeqi WP_012015166.1. NC_009380.1.
    YP_001160776.1. NC_009380.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 369723.Strop_3968.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABP56398 ; ABP56398 ; Strop_3968 .
    GeneIDi 5060449.
    KEGGi stp:Strop_3968.
    PATRICi 23447144. VBISalTro43511_4097.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi VEVKYGQ.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci STRO369723:GI49-4020-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Salinispora tropica CNB-440."
      Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Sun H., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Jensen P.R., Moore B.S., Udwary D.W., Richardson P.
      Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC BAA-916 / DSM 44818 / CNB-440Imported.

    Entry informationi

    Entry nameiA4XBU1_SALTO
    AccessioniPrimary (citable) accession number: A4XBU1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 29, 2007
    Last sequence update: May 29, 2007
    Last modified: October 1, 2014
    This is version 47 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3