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Protein
Submitted name:

DNA primase, small subunit

Gene

Strop_3967

Organism
Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciSTRO369723:GI49-4019-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA primase, small subunitImported
Gene namesi
Ordered Locus Names:Strop_3967Imported
OrganismiSalinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)Imported
Taxonomic identifieri369723 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeSalinispora
ProteomesiUP000000235 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi369723.Strop_3967.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000244654.
KOiK01971.
OMAiCVYSLRA.
OrthoDBiEOG6FV833.

Family and domain databases

InterProiIPR014145. LigD_pol.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

A4XBU0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDRLRVDVA GRTLELSNLD KVLYPATGFT KGEVIDYYTR VAPVLLPHLS
60 70 80 90 100
DRALTRIRFP NGVDGSSFFE KNAPAATPSW VRTETLPVPG SAKGRETIDY
110 120 130 140 150
VVADELPTLV WLANLAALEL HTPQWQIGAH PDLMVVDLDP GEPAGLRQGC
160 170 180 190 200
QVALLLRERL ADDGIEAYPK TSGKKGMQLC CPIAGTQPAD VVSGYARRIA
210 220 230 240 250
QELERAHPSL VVSKMARKLR AGKIFIDWSQ NNAAKTTVAP YSLRAQSVPA
260 270 280 290 300
VSTPLTWAEV EAGGAGKRPS VRPYAAAEVL TRVAEQGDLL APLLAGGPEL

PG
Length:302
Mass (Da):32,461
Last modified:May 29, 2007 - v1
Checksum:i31765FE8B0A492D2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000667 Genomic DNA. Translation: ABP56397.1.
RefSeqiYP_001160775.1. NC_009380.1.

Genome annotation databases

EnsemblBacteriaiABP56397; ABP56397; Strop_3967.
GeneIDi5060448.
KEGGistp:Strop_3967.
PATRICi23447142. VBISalTro43511_4096.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000667 Genomic DNA. Translation: ABP56397.1.
RefSeqiYP_001160775.1. NC_009380.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi369723.Strop_3967.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABP56397; ABP56397; Strop_3967.
GeneIDi5060448.
KEGGistp:Strop_3967.
PATRICi23447142. VBISalTro43511_4096.

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000244654.
KOiK01971.
OMAiCVYSLRA.
OrthoDBiEOG6FV833.

Enzyme and pathway databases

BioCyciSTRO369723:GI49-4019-MONOMER.

Family and domain databases

InterProiIPR014145. LigD_pol.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Salinispora tropica CNB-440."
    Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Sun H., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Jensen P.R., Moore B.S., Udwary D.W., Richardson P.
    Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-916 / DSM 44818 / CNB-440Imported.

Entry informationi

Entry nameiA4XBU0_SALTO
AccessioniPrimary (citable) accession number: A4XBU0
Entry historyi
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: January 7, 2015
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.