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A4XAT4 (A4XAT4_SALTO) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Glycoside hydrolase, family 6 EMBL ABP56033.1
Gene names
Ordered Locus Names:Strop_3602
OrganismSalinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) [Complete proteome] [HAMAP] EMBL ABP56033.1
Taxonomic identifier369723 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micromonosporineae › Micromonosporaceae › Salinispora

Protein attributes

Sequence length620 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL ABP56033.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcellulose catabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionhydrolase activity, hydrolyzing O-glycosyl compounds

Inferred from electronic annotation. Source: InterPro

polysaccharide binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A4XAT4 [UniParc].

Last modified May 29, 2007. Version 1.
Checksum: B3A08AE1216178F3

FASTA62065,621
        10         20         30         40         50         60 
MSASTGSLGR GRPRIGLSPK EICGMNVWRR LSVPRPALAL TGAGVLVVGG LVTLPVTMAH 

        70         80         90        100        110        120 
AATQCEVSYT TNDWPGGFTA SLSIKNTGEA LDGWTLRFTF PNSSQQVVHG WSARYSQSGQ 

       130        140        150        160        170        180 
NVAVQNESYN GLVPSGATIE IGFNGLWSGS NPKPTSFTLN EVACNGGGGP TTAPPTTTPP 

       190        200        210        220        230        240 
TTAPPTTPPP TTPPPTTAPP GGRVDNPYLN AVGYVNPEWK AKAESVSGGN RVSNTSTAVW 

       250        260        270        280        290        300 
IDRIAAIEGT DDSQSNGPMG IRDHLDEALS QGADYIQFVI YNLPGRDCAA LASNGELAPD 

       310        320        330        340        350        360 
ELPRYKAEFI DPIAAIQSDA AYQDLRIINI IEIDSLPNLH ANTGSNPGAT PTCELVKQNG 

       370        380        390        400        410        420 
AYVNGIGYAL ATLGAISNVY NYVDAAHHGW IGWDTNFSPV ALLLKDAATA SGSTLDDVHG 

       430        440        450        460        470        480 
FIVNTANYSA LREPYFQITD TVNGQTIRQS TWVDWNQYVD ELSFAQDFRD ELVAKGFDSG 

       490        500        510        520        530        540 
VGMLIDTSRN GWGGSARPTA PGPTTDVDSY VDGGRVDRRI HAGNWCNQSG AGLGERPQAA 

       550        560        570        580        590        600 
PEPGIDAYVW VKPPGESDGS SEEIPNNDGK GFDRMCDPTY EGNARNGFNP SGALPDAPIS 

       610        620 
GAWFPAQFQQ LMQNAYPPLS

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References

[1]"Complete sequence of Salinispora tropica CNB-440."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Sun H., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Jensen P.R., Moore B.S., Udwary D.W., Richardson P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000667 Genomic DNA. Translation: ABP56033.1.
RefSeqYP_001160411.1. NC_009380.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGA4XAT4.

Protein family/group databases

CAZyCBM2. Carbohydrate-Binding Module Family 2.
GH6. Glycoside Hydrolase Family 6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5060077.
GenomeReviewsGene locus Strop_3602 in contig CP000667_GR.
KEGGstp:Strop_3602.
PATRIC23446370. VBISalTro43511_3716.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG5297.
HOGENOMHBG756137.
OMANTYVNSG.
ProtClustDBCLSK2787695.

Enzyme and pathway databases

BioCycSTRO369723:STROP_3602-MONOMER.

Family and domain databases

InterProIPR016288. Beta_cellobiohydrolase.
IPR008965. Carb-bd_dom.
IPR012291. CBD_carb-bd_dom.
IPR001919. Cellulose-bd_dom_fam2_bac.
IPR001524. Glyco_hydro_6_CS.
[Graphical view]
Gene3DG3DSA:2.60.40.290. CBD_carb_bd. 1 hit.
G3DSA:3.20.20.40. Glyco_hydro_6. 1 hit.
PfamPF00553. CBM_2. 1 hit.
PF01341. Glyco_hydro_6. 1 hit.
[Graphical view]
PIRSFPIRSF001100. Beta_cellobiohydrolase. 1 hit.
PRINTSPR00733. GLHYDRLASE6.
SMARTSM00637. CBD_II. 1 hit.
[Graphical view]
SUPFAMSSF49384. Cellul_bind. 1 hit.
SSF51989. Glyco_hydro_6. 1 hit.
PROSITEPS51173. CBM2. 1 hit.
PS00655. GLYCOSYL_HYDROL_F6_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA4XAT4_SALTO
AccessionPrimary (citable) accession number: A4XAT4
Entry history
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: January 25, 2012
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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