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A4X8D0

- A4X8D0_SALTO

UniProt

A4X8D0 - A4X8D0_SALTO

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Protein
Alpha-amylase
Gene
Strop_2686
Organism
Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro
  3. starch binding Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciSTRO369723:GI49-2720-MONOMER.

Protein family/group databases

CAZyiCBM20. Carbohydrate-Binding Module Family 20.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Strop_2686Imported
OrganismiSalinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)Imported
Taxonomic identifieri369723 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeSalinispora
ProteomesiUP000000235: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 4242 PredictedImported
Add
BLAST
Chaini43 – 722680 PredictedImported
PRO_5000239375Add
BLAST

Proteomic databases

PRIDEiA4X8D0.

Interactioni

Protein-protein interaction databases

STRINGi369723.Strop_2686.

Structurei

3D structure databases

ProteinModelPortaliA4X8D0.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000253313.
KOiK01176.
OMAiAWIGIND.
OrthoDBiEOG6RZB1B.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 2 hits.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 2 hits.
[Graphical view]
SUPFAMiSSF49452. SSF49452. 2 hits.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51166. CBM20. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A4X8D0-1 [UniParc]FASTAAdd to Basket

« Hide

METARPHPIG RTGRLVLAAA LVAVGGTAVV TAATTATSAR AAVVLNDSEV    50
TANLWQWNWD SVAAACTDHL GPAGYGAVQV APPQESVYLP NSADGVHPWY 100
EVYQPVSYQL ESRFGNREQF ASMVSTCHDA GVRVYVDAIV NHMAGTNNPP 150
GTRGYAGTEF SGYDYPAVPY SGWDFHRPGD NCPTDGSIND WDNVAQVTSC 200
ELLSLADLYT EKEYVRDTIA GYLNDLIGLG VDGFRVDAVK HIRKDDFAAI 250
LSRLDDTVAE GRRPYVAQEI FDGANNPDLQ ARAFIGNGDV LDFAYAKGIR 300
SAFQGSVAAL QNIPNWNLDA PSANVFSMVT NHDLERDGVV LSYKDGTDYV 350
LANYFALAYP HGKPSVFDSF TWSDRNQSPP HDGGGYVTDA VCGGTWNCLT 400
QSTGIKGMVG WANAARSVQS TADFTVVNDN VIGFHRGDRA WIGINDSGAT 450
ATATFTTGLA DGDYCDVISG AAGGAGCTGA TVSVTGGQAT VSIPANDAVA 500
IHVNARPGAT PSPTVSPTGD PTDQIATTFT VSATPGADQD VYAVGSISEL 550
GSWAPAAAVR LTPQGGNTYR GTIDLPPSTA VEYKFIKVTS GGEVTWESGE 600
NRSFTTPASG TFAVTETFRG DVVSGPAIAS SFHATVYTYF GQNAFVIGNV 650
AELGSWNPDN AVALSAADYP VWRATVDLPP NTNIEYKYLK KNPDGSVTWE 700
SGANRSFTTP ATGTNTNTDT WR 722
Length:722
Mass (Da):76,315
Last modified:May 29, 2007 - v1
Checksum:i768E10A741F5EFFA
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000667 Genomic DNA. Translation: ABP55130.1.
RefSeqiYP_001159508.1. NC_009380.1.

Genome annotation databases

EnsemblBacteriaiABP55130; ABP55130; Strop_2686.
GeneIDi5059149.
KEGGistp:Strop_2686.
PATRICi23444446. VBISalTro43511_2765.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000667 Genomic DNA. Translation: ABP55130.1 .
RefSeqi YP_001159508.1. NC_009380.1.

3D structure databases

ProteinModelPortali A4X8D0.
ModBasei Search...

Protein-protein interaction databases

STRINGi 369723.Strop_2686.

Protein family/group databases

CAZyi CBM20. Carbohydrate-Binding Module Family 20.
GH13. Glycoside Hydrolase Family 13.

Proteomic databases

PRIDEi A4X8D0.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABP55130 ; ABP55130 ; Strop_2686 .
GeneIDi 5059149.
KEGGi stp:Strop_2686.
PATRICi 23444446. VBISalTro43511_2765.

Phylogenomic databases

eggNOGi COG0366.
HOGENOMi HOG000253313.
KOi K01176.
OMAi AWIGIND.
OrthoDBi EOG6RZB1B.

Enzyme and pathway databases

BioCyci STRO369723:GI49-2720-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 2 hits.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SMARTi SM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 2 hits.
[Graphical view ]
SUPFAMi SSF49452. SSF49452. 2 hits.
SSF51445. SSF51445. 1 hit.
PROSITEi PS51166. CBM20. 2 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Salinispora tropica CNB-440."
    Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Sun H., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Jensen P.R., Moore B.S., Udwary D.W., Richardson P.
    Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-916 / DSM 44818 / CNB-440.

Entry informationi

Entry nameiA4X8D0_SALTO
AccessioniPrimary (citable) accession number: A4X8D0
Entry historyi
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: July 9, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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