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A4X8D0 (A4X8D0_SALTO) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:Strop_2686 EMBL ABP55130.1
OrganismSalinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) [Complete proteome] [HAMAP] EMBL ABP55130.1
Taxonomic identifier369723 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeSalinispora

Protein attributes

Sequence length722 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 4242 Potential EMBL ABP55130.1
Chain43 – 722680 Potential EMBL ABP55130.1
PRO_5000239375

Sequences

Sequence LengthMass (Da)Tools
A4X8D0 [UniParc].

Last modified May 29, 2007. Version 1.
Checksum: 768E10A741F5EFFA

FASTA72276,315
        10         20         30         40         50         60 
METARPHPIG RTGRLVLAAA LVAVGGTAVV TAATTATSAR AAVVLNDSEV TANLWQWNWD 

        70         80         90        100        110        120 
SVAAACTDHL GPAGYGAVQV APPQESVYLP NSADGVHPWY EVYQPVSYQL ESRFGNREQF 

       130        140        150        160        170        180 
ASMVSTCHDA GVRVYVDAIV NHMAGTNNPP GTRGYAGTEF SGYDYPAVPY SGWDFHRPGD 

       190        200        210        220        230        240 
NCPTDGSIND WDNVAQVTSC ELLSLADLYT EKEYVRDTIA GYLNDLIGLG VDGFRVDAVK 

       250        260        270        280        290        300 
HIRKDDFAAI LSRLDDTVAE GRRPYVAQEI FDGANNPDLQ ARAFIGNGDV LDFAYAKGIR 

       310        320        330        340        350        360 
SAFQGSVAAL QNIPNWNLDA PSANVFSMVT NHDLERDGVV LSYKDGTDYV LANYFALAYP 

       370        380        390        400        410        420 
HGKPSVFDSF TWSDRNQSPP HDGGGYVTDA VCGGTWNCLT QSTGIKGMVG WANAARSVQS 

       430        440        450        460        470        480 
TADFTVVNDN VIGFHRGDRA WIGINDSGAT ATATFTTGLA DGDYCDVISG AAGGAGCTGA 

       490        500        510        520        530        540 
TVSVTGGQAT VSIPANDAVA IHVNARPGAT PSPTVSPTGD PTDQIATTFT VSATPGADQD 

       550        560        570        580        590        600 
VYAVGSISEL GSWAPAAAVR LTPQGGNTYR GTIDLPPSTA VEYKFIKVTS GGEVTWESGE 

       610        620        630        640        650        660 
NRSFTTPASG TFAVTETFRG DVVSGPAIAS SFHATVYTYF GQNAFVIGNV AELGSWNPDN 

       670        680        690        700        710        720 
AVALSAADYP VWRATVDLPP NTNIEYKYLK KNPDGSVTWE SGANRSFTTP ATGTNTNTDT 


WR 

« Hide

References

[1]"Complete sequence of Salinispora tropica CNB-440."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Sun H., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Jensen P.R., Moore B.S., Udwary D.W., Richardson P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-916 / DSM 44818 / CNB-440.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000667 Genomic DNA. Translation: ABP55130.1.
RefSeqYP_001159508.1. NC_009380.1.

3D structure databases

ProteinModelPortalA4X8D0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING369723.Strop_2686.

Protein family/group databases

CAZyCBM20. Carbohydrate-Binding Module Family 20.
GH13. Glycoside Hydrolase Family 13.

Proteomic databases

PRIDEA4X8D0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABP55130; ABP55130; Strop_2686.
GeneID5059149.
KEGGstp:Strop_2686.
PATRIC23444446. VBISalTro43511_2765.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000253313.
KOK01176.
OMAAWIGIND.
OrthoDBEOG6RZB1B.
ProtClustDBCLSK969423.

Enzyme and pathway databases

BioCycSTRO369723:GI49-2720-MONOMER.

Family and domain databases

Gene3D2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 2 hits.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 2 hits.
[Graphical view]
SUPFAMSSF49452. SSF49452. 2 hits.
SSF51445. SSF51445. 1 hit.
PROSITEPS51166. CBM20. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA4X8D0_SALTO
AccessionPrimary (citable) accession number: A4X8D0
Entry history
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: November 13, 2013
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)