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A4X8D0

- A4X8D0_SALTO

UniProt

A4X8D0 - A4X8D0_SALTO

Protein

Alpha-amylase

Gene

Strop_2686

Organism
Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 51 (01 Oct 2014)
      Sequence version 1 (29 May 2007)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro
    3. starch binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Enzyme and pathway databases

    BioCyciSTRO369723:GI49-2720-MONOMER.

    Protein family/group databases

    CAZyiCBM20. Carbohydrate-Binding Module Family 20.
    GH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:Strop_2686Imported
    OrganismiSalinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)Imported
    Taxonomic identifieri369723 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeSalinispora
    ProteomesiUP000000235: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 4242 PotentialImportedAdd
    BLAST
    Chaini43 – 722680 PotentialImportedPRO_5000239375Add
    BLAST

    Proteomic databases

    PRIDEiA4X8D0.

    Interactioni

    Protein-protein interaction databases

    STRINGi369723.Strop_2686.

    Structurei

    3D structure databases

    ProteinModelPortaliA4X8D0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000253313.
    KOiK01176.
    OMAiAWIGIND.
    OrthoDBiEOG6RZB1B.

    Family and domain databases

    Gene3Di2.60.40.10. 2 hits.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR006048. A-amylase_b_C.
    IPR006046. Alpha_amylase.
    IPR013784. Carb-bd-like_fold.
    IPR002044. CBM_fam20.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF00686. CBM_20. 2 hits.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SMARTiSM00632. Aamy_C. 1 hit.
    SM01065. CBM_2. 2 hits.
    [Graphical view]
    SUPFAMiSSF49452. SSF49452. 2 hits.
    SSF51445. SSF51445. 1 hit.
    PROSITEiPS51166. CBM20. 2 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    A4X8D0-1 [UniParc]FASTAAdd to Basket

    « Hide

    METARPHPIG RTGRLVLAAA LVAVGGTAVV TAATTATSAR AAVVLNDSEV    50
    TANLWQWNWD SVAAACTDHL GPAGYGAVQV APPQESVYLP NSADGVHPWY 100
    EVYQPVSYQL ESRFGNREQF ASMVSTCHDA GVRVYVDAIV NHMAGTNNPP 150
    GTRGYAGTEF SGYDYPAVPY SGWDFHRPGD NCPTDGSIND WDNVAQVTSC 200
    ELLSLADLYT EKEYVRDTIA GYLNDLIGLG VDGFRVDAVK HIRKDDFAAI 250
    LSRLDDTVAE GRRPYVAQEI FDGANNPDLQ ARAFIGNGDV LDFAYAKGIR 300
    SAFQGSVAAL QNIPNWNLDA PSANVFSMVT NHDLERDGVV LSYKDGTDYV 350
    LANYFALAYP HGKPSVFDSF TWSDRNQSPP HDGGGYVTDA VCGGTWNCLT 400
    QSTGIKGMVG WANAARSVQS TADFTVVNDN VIGFHRGDRA WIGINDSGAT 450
    ATATFTTGLA DGDYCDVISG AAGGAGCTGA TVSVTGGQAT VSIPANDAVA 500
    IHVNARPGAT PSPTVSPTGD PTDQIATTFT VSATPGADQD VYAVGSISEL 550
    GSWAPAAAVR LTPQGGNTYR GTIDLPPSTA VEYKFIKVTS GGEVTWESGE 600
    NRSFTTPASG TFAVTETFRG DVVSGPAIAS SFHATVYTYF GQNAFVIGNV 650
    AELGSWNPDN AVALSAADYP VWRATVDLPP NTNIEYKYLK KNPDGSVTWE 700
    SGANRSFTTP ATGTNTNTDT WR 722
    Length:722
    Mass (Da):76,315
    Last modified:May 29, 2007 - v1
    Checksum:i768E10A741F5EFFA
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000667 Genomic DNA. Translation: ABP55130.1.
    RefSeqiYP_001159508.1. NC_009380.1.

    Genome annotation databases

    EnsemblBacteriaiABP55130; ABP55130; Strop_2686.
    GeneIDi5059149.
    KEGGistp:Strop_2686.
    PATRICi23444446. VBISalTro43511_2765.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000667 Genomic DNA. Translation: ABP55130.1 .
    RefSeqi YP_001159508.1. NC_009380.1.

    3D structure databases

    ProteinModelPortali A4X8D0.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 369723.Strop_2686.

    Protein family/group databases

    CAZyi CBM20. Carbohydrate-Binding Module Family 20.
    GH13. Glycoside Hydrolase Family 13.

    Proteomic databases

    PRIDEi A4X8D0.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABP55130 ; ABP55130 ; Strop_2686 .
    GeneIDi 5059149.
    KEGGi stp:Strop_2686.
    PATRICi 23444446. VBISalTro43511_2765.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000253313.
    KOi K01176.
    OMAi AWIGIND.
    OrthoDBi EOG6RZB1B.

    Enzyme and pathway databases

    BioCyci STRO369723:GI49-2720-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.10. 2 hits.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR006048. A-amylase_b_C.
    IPR006046. Alpha_amylase.
    IPR013784. Carb-bd-like_fold.
    IPR002044. CBM_fam20.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF00686. CBM_20. 2 hits.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SMARTi SM00632. Aamy_C. 1 hit.
    SM01065. CBM_2. 2 hits.
    [Graphical view ]
    SUPFAMi SSF49452. SSF49452. 2 hits.
    SSF51445. SSF51445. 1 hit.
    PROSITEi PS51166. CBM20. 2 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Salinispora tropica CNB-440."
      Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Sun H., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Jensen P.R., Moore B.S., Udwary D.W., Richardson P.
      Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC BAA-916 / DSM 44818 / CNB-440Imported.

    Entry informationi

    Entry nameiA4X8D0_SALTO
    AccessioniPrimary (citable) accession number: A4X8D0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 29, 2007
    Last sequence update: May 29, 2007
    Last modified: October 1, 2014
    This is version 51 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3