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Protein

Alpha-amylase

Gene

Strop_2686

Organism
Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseUniRule annotation, Hydrolase
Biological processCarbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciSTRO369723:G20X-7044-MONOMER

Protein family/group databases

CAZyiCBM20 Carbohydrate-Binding Module Family 20
GH13 Glycoside Hydrolase Family 13

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Strop_2686Imported
OrganismiSalinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)Imported
Taxonomic identifieri369723 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicromonosporalesMicromonosporaceaeSalinispora
Proteomesi
  • UP000000235 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 41Sequence analysisAdd BLAST41
ChainiPRO_500267668742 – 722Alpha-amylaseSequence analysisAdd BLAST681

Interactioni

Protein-protein interaction databases

STRINGi369723.Strop_2686

Structurei

3D structure databases

ProteinModelPortaliA4X8D0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini519 – 620CBM20InterPro annotationAdd BLAST102
Domaini622 – 722CBM20InterPro annotationAdd BLAST101

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105E54 Bacteria
COG0366 LUCA
HOGENOMiHOG000253313
KOiK01176
OMAiHPWWEVY
OrthoDBiPOG091H0CDS

Family and domain databases

Gene3Di2.60.40.10, 2 hits
2.60.40.1180, 1 hit
InterProiView protein in InterPro
IPR031319 A-amylase_C
IPR006046 Alpha_amylase
IPR013784 Carb-bd-like_fold
IPR002044 CBM_fam20
IPR006047 Glyco_hydro_13_cat_dom
IPR013780 Glyco_hydro_b
IPR017853 Glycoside_hydrolase_SF
IPR013783 Ig-like_fold
PfamiView protein in Pfam
PF00128 Alpha-amylase, 1 hit
PF00686 CBM_20, 2 hits
PRINTSiPR00110 ALPHAAMYLASE
SMARTiView protein in SMART
SM00642 Aamy, 1 hit
SM00632 Aamy_C, 1 hit
SM01065 CBM_2, 2 hits
SUPFAMiSSF49452 SSF49452, 2 hits
SSF51445 SSF51445, 1 hit
PROSITEiView protein in PROSITE
PS51166 CBM20, 2 hits

Sequencei

Sequence statusi: Complete.

A4X8D0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
METARPHPIG RTGRLVLAAA LVAVGGTAVV TAATTATSAR AAVVLNDSEV
60 70 80 90 100
TANLWQWNWD SVAAACTDHL GPAGYGAVQV APPQESVYLP NSADGVHPWY
110 120 130 140 150
EVYQPVSYQL ESRFGNREQF ASMVSTCHDA GVRVYVDAIV NHMAGTNNPP
160 170 180 190 200
GTRGYAGTEF SGYDYPAVPY SGWDFHRPGD NCPTDGSIND WDNVAQVTSC
210 220 230 240 250
ELLSLADLYT EKEYVRDTIA GYLNDLIGLG VDGFRVDAVK HIRKDDFAAI
260 270 280 290 300
LSRLDDTVAE GRRPYVAQEI FDGANNPDLQ ARAFIGNGDV LDFAYAKGIR
310 320 330 340 350
SAFQGSVAAL QNIPNWNLDA PSANVFSMVT NHDLERDGVV LSYKDGTDYV
360 370 380 390 400
LANYFALAYP HGKPSVFDSF TWSDRNQSPP HDGGGYVTDA VCGGTWNCLT
410 420 430 440 450
QSTGIKGMVG WANAARSVQS TADFTVVNDN VIGFHRGDRA WIGINDSGAT
460 470 480 490 500
ATATFTTGLA DGDYCDVISG AAGGAGCTGA TVSVTGGQAT VSIPANDAVA
510 520 530 540 550
IHVNARPGAT PSPTVSPTGD PTDQIATTFT VSATPGADQD VYAVGSISEL
560 570 580 590 600
GSWAPAAAVR LTPQGGNTYR GTIDLPPSTA VEYKFIKVTS GGEVTWESGE
610 620 630 640 650
NRSFTTPASG TFAVTETFRG DVVSGPAIAS SFHATVYTYF GQNAFVIGNV
660 670 680 690 700
AELGSWNPDN AVALSAADYP VWRATVDLPP NTNIEYKYLK KNPDGSVTWE
710 720
SGANRSFTTP ATGTNTNTDT WR
Length:722
Mass (Da):76,315
Last modified:May 29, 2007 - v1
Checksum:i768E10A741F5EFFA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000667 Genomic DNA Translation: ABP55130.1
RefSeqiWP_012013911.1, NC_009380.1

Genome annotation databases

EnsemblBacteriaiABP55130; ABP55130; Strop_2686
GeneIDi5059149
KEGGistp:Strop_2686
PATRICifig|369723.5.peg.2765

Similar proteinsi

Entry informationi

Entry nameiA4X8D0_SALTO
AccessioniPrimary (citable) accession number: A4X8D0
Entry historyiIntegrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: June 20, 2018
This is version 80 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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