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A4X7B4 (A4X7B4_SALTO) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:Strop_2316 EMBL ABP54764.1
OrganismSalinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) [Complete proteome] [HAMAP] EMBL ABP54764.1
Taxonomic identifier369723 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeSalinispora

Protein attributes

Sequence length369 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH merR-type DNA-binding domain. RuleBase RU000703

Ontologies

Keywords
   LigandDNA-binding RuleBase RU000703
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processregulation of transcription, DNA-templated

Inferred from electronic annotation. Source: InterPro

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

catalytic activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A4X7B4 [UniParc].

Last modified May 29, 2007. Version 1.
Checksum: 91AFFD1D4D046A4A

FASTA36938,457
        10         20         30         40         50         60 
MHAGRGDRHE EDVDVGLLTI GAFSRAAGLT PKALRLYDEV GLLPPAAVDP ESGYRLYDPE 

        70         80         90        100        110        120 
QLPLARLVAQ LRRIGMPLAK IRTVSGLAPT AAAEAITAYW RQVTADTAAR ARLATFLVDH 

       130        140        150        160        170        180 
LSAGSTTMSH ANPTLVVRYA AGCDTGAIRD SNEDVAYASD RLLAVADGMR GPGGAAASAA 

       190        200        210        220        230        240 
AIDALKALEL VDVPAADLLT MLAGAVTDAD RTVQALATDD HQPITTLTAL LRSGSQLALV 

       250        260        270        280        290        300 
HVGDTRAYLL RGGELFLLTQ DHTWVQTQVD QGKLDRDEAT AHPQRAVLVR ALGGGQQVEA 

       310        320        330        340        350        360 
DLALRTALPG DRYLLCSDGL SAVVDRAALQ SALSTATDPE DAVQQLTGLA QAAGAPDNIA 


CVIADIAAV 

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References

[1]"Complete sequence of Salinispora tropica CNB-440."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Sun H., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Jensen P.R., Moore B.S., Udwary D.W., Richardson P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-916 / DSM 44818 / CNB-440.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000667 Genomic DNA. Translation: ABP54764.1.
RefSeqYP_001159142.1. NC_009380.1.

3D structure databases

ProteinModelPortalA4X7B4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING369723.Strop_2316.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABP54764; ABP54764; Strop_2316.
GeneID5058779.
KEGGstp:Strop_2316.
PATRIC23443672. VBISalTro43511_2378.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0789.
HOGENOMHOG000235782.
OMANQDTAYA.
OrthoDBEOG65N17S.
ProtClustDBCLSK903257.

Enzyme and pathway databases

BioCycSTRO369723:GI49-2350-MONOMER.

Family and domain databases

Gene3D3.60.40.10. 1 hit.
InterProIPR009061. DNA-bd_dom_put.
IPR000551. MerR-type_HTH_dom.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamPF13411. MerR_1. 1 hit.
[Graphical view]
SMARTSM00422. HTH_MERR. 1 hit.
SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMSSF46955. SSF46955. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEPS00552. HTH_MERR_1. 1 hit.
PS50937. HTH_MERR_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA4X7B4_SALTO
AccessionPrimary (citable) accession number: A4X7B4
Entry history
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: April 16, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)