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Protein
Submitted name:

Regulatory protein, MerR

Gene

Strop_2316

Organism
Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. DNA binding Source: UniProtKB-KW

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: InterPro
Complete GO annotation...

Keywords - Ligandi

DNA-bindingUniRule annotation

Enzyme and pathway databases

BioCyciSTRO369723:GI49-2350-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Regulatory protein, MerRImported
Gene namesi
Ordered Locus Names:Strop_2316Imported
OrganismiSalinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)Imported
Taxonomic identifieri369723 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeSalinispora
ProteomesiUP000000235: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi369723.Strop_2316.

Structurei

3D structure databases

ProteinModelPortaliA4X7B4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 HTH merR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

eggNOGiCOG0789.
HOGENOMiHOG000235782.
OMAiNQDTAYA.
OrthoDBiEOG65N17S.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR009061. DNA-bd_dom_put.
IPR000551. MerR-type_HTH_dom.
IPR001932. PP2C-like_dom.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERiPTHR13832. PTHR13832. 1 hit.
PfamiPF13411. MerR_1. 1 hit.
[Graphical view]
SMARTiSM00422. HTH_MERR. 1 hit.
SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF46955. SSF46955. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEiPS00552. HTH_MERR_1. 1 hit.
PS50937. HTH_MERR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A4X7B4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MHAGRGDRHE EDVDVGLLTI GAFSRAAGLT PKALRLYDEV GLLPPAAVDP
60 70 80 90 100
ESGYRLYDPE QLPLARLVAQ LRRIGMPLAK IRTVSGLAPT AAAEAITAYW
110 120 130 140 150
RQVTADTAAR ARLATFLVDH LSAGSTTMSH ANPTLVVRYA AGCDTGAIRD
160 170 180 190 200
SNEDVAYASD RLLAVADGMR GPGGAAASAA AIDALKALEL VDVPAADLLT
210 220 230 240 250
MLAGAVTDAD RTVQALATDD HQPITTLTAL LRSGSQLALV HVGDTRAYLL
260 270 280 290 300
RGGELFLLTQ DHTWVQTQVD QGKLDRDEAT AHPQRAVLVR ALGGGQQVEA
310 320 330 340 350
DLALRTALPG DRYLLCSDGL SAVVDRAALQ SALSTATDPE DAVQQLTGLA
360
QAAGAPDNIA CVIADIAAV
Length:369
Mass (Da):38,457
Last modified:May 29, 2007 - v1
Checksum:i91AFFD1D4D046A4A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000667 Genomic DNA. Translation: ABP54764.1.
RefSeqiYP_001159142.1. NC_009380.1.

Genome annotation databases

EnsemblBacteriaiABP54764; ABP54764; Strop_2316.
GeneIDi5058779.
KEGGistp:Strop_2316.
PATRICi23443672. VBISalTro43511_2378.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000667 Genomic DNA. Translation: ABP54764.1.
RefSeqiYP_001159142.1. NC_009380.1.

3D structure databases

ProteinModelPortaliA4X7B4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi369723.Strop_2316.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABP54764; ABP54764; Strop_2316.
GeneIDi5058779.
KEGGistp:Strop_2316.
PATRICi23443672. VBISalTro43511_2378.

Phylogenomic databases

eggNOGiCOG0789.
HOGENOMiHOG000235782.
OMAiNQDTAYA.
OrthoDBiEOG65N17S.

Enzyme and pathway databases

BioCyciSTRO369723:GI49-2350-MONOMER.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR009061. DNA-bd_dom_put.
IPR000551. MerR-type_HTH_dom.
IPR001932. PP2C-like_dom.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERiPTHR13832. PTHR13832. 1 hit.
PfamiPF13411. MerR_1. 1 hit.
[Graphical view]
SMARTiSM00422. HTH_MERR. 1 hit.
SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF46955. SSF46955. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEiPS00552. HTH_MERR_1. 1 hit.
PS50937. HTH_MERR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Salinispora tropica CNB-440."
    Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Sun H., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Jensen P.R., Moore B.S., Udwary D.W., Richardson P.
    Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-916 / DSM 44818 / CNB-440Imported.

Entry informationi

Entry nameiA4X7B4_SALTO
AccessioniPrimary (citable) accession number: A4X7B4
Entry historyi
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: February 4, 2015
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.