A4X5X6 (A4X5X6_SALTO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Protein-export membrane protein SecF HAMAP-Rule MF_01464

Gene names

Name:	secF HAMAP-Rule MF_01464
Ordered Locus Names:	Strop_1813 EMBL ABP54276.1

Organism

Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) [Complete proteome] [HAMAP] EMBL ABP54276.1

Taxonomic identifier

369723 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micromonosporineae › Micromonosporaceae › Salinispora › Salinispora tropica

Protein attributes

Sequence length	394 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA By similarity. HAMAP-Rule MF_01464
Subunit structure	Forms a complex with SecD. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF. Other proteins may also be involved By similarity. HAMAP-Rule MF_01464
Subcellular location	Cell membrane; Multi-pass membrane protein By similarity HAMAP-Rule MF_01464.
Sequence similarities	Belongs to the SecD/SecF family. SecF subfamily. HAMAP-Rule MF_01464

Ontologies

Keywords
Biological process	Protein transport Translocation HAMAP-Rule MF_01464 Transport
Cellular component	Cell membrane HAMAP-Rule MF_01464 Membrane
Domain	Transmembrane Transmembrane helix HAMAP-Rule MF_01464
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	intracellular protein transport Inferred from electronic annotation. Source: InterPro
Molecular_function	P-P-bond-hydrolysis-driven protein transmembrane transporter activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	Transmembrane	26 – 46	21	Helical; By similarity HAMAP-Rule MF_01464
	Transmembrane	149 – 169	21	Helical; By similarity HAMAP-Rule MF_01464
	Transmembrane	175 – 195	21	Helical; By similarity HAMAP-Rule MF_01464
	Transmembrane	200 – 220	21	Helical; By similarity HAMAP-Rule MF_01464
	Transmembrane	258 – 278	21	Helical; By similarity HAMAP-Rule MF_01464
	Transmembrane	283 – 303	21	Helical; By similarity HAMAP-Rule MF_01464

Sequences

	Sequence		Length	Mass (Da)
	A4X5X6 [UniParc]. Last modified May 29, 2007. Version 1. Checksum: 15A627F47EE4D110	FASTA	394	41,053
	10 20 30 40 50 60 MAGAGLASRL YRGEAGLDIV GRRRVWFSVA GALALISVLS FAFLRFDLGI EFAGGNSIQV 70 80 90 100 110 120 PASVGTLEQA EEAVDAALAA EGGGAEVVTA QKVGGTGDDF YEMRTSQLSA EQANAVKAAV 130 140 150 160 170 180 AQEFGLPVSD VGGEQVSQAW GSQVTERAVL GLVIFLVLVM VYLVLRFEWR MAVGAVSSLL 190 200 210 220 230 240 MNLVLSAGIY SLVGFEVTPS TVIGFLTILG FALYDVVVVF DKVQENTRGI TANNNQTYGE 250 260 270 280 290 300 AANLAINQSL MRSLNTSIVA LLPVGGLLFI GAGFFGAGTL KDLGLVLFVG MAVAFFSSIT 310 320 330 340 350 360 LATPLLVLLK NREPRIQAHN KRVLTRRAAL ERGEGSAKNA PQPTESADEE IDPEATALAG 370 380 390 AAPKVGARPA GKRPTGARGG RSAGGGNRPG GKRR

References

[1]

"Complete sequence of Salinispora tropica CNB-440." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Sun H., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Jensen P.R., Moore B.S., Udwary D.W., Richardson P. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-916 / DSM 44818 / CNB-440.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000667 Genomic DNA. Translation: ABP54276.1.
RefSeq	YP_001158654.1. NC_009380.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	369723.Strop_1813.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABP54276; ABP54276; Strop_1813.
GeneID	5058272.
KEGG	stp:Strop_1813.
PATRIC	23442630. VBISalTro43511_1861.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0341.
HOGENOM	HOG000245915.
KO	K03074.
OMA	VIEISLE.
ProtClustDB	CLSK969152.
Enzyme and pathway databases
BioCyc	STRO369723:GI49-1843-MONOMER.
Family and domain databases
HAMAP	MF_01464_B. SecF_B.
InterPro	IPR022813. SecD/SecF_arch_bac. IPR022645. SecD/SecF_bac. IPR005665. SecF_bac. [Graphical view]
Pfam	PF02355. SecD_SecF. 1 hit. [Graphical view]
PRINTS	PR01755. SECFTRNLCASE.
TIGRFAMs	TIGR00966. 3a0501s07. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A4X5X6_SALTO

Accession

Primary (citable) accession number: A4X5X6

Entry history

Integrated into UniProtKB/TrEMBL:	May 29, 2007
Last sequence update:	May 29, 2007
Last modified:	May 29, 2013
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)