A4X5W1 (A4X5W1_SALTO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA polymerase III, alpha subunit EMBL ABP54261.1
EC=2.7.7.7 EMBL ABP54261.1

Gene names

Ordered Locus Names:

Strop_1798

Organism

Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) [Complete proteome] [HAMAP] EMBL ABP54261.1

Taxonomic identifier

369723 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micromonosporineae › Micromonosporaceae › Salinispora

Protein attributes

Sequence length	1177 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Catalytic activity

Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). SAAS SAAS004013

Ontologies

Keywords
Biological process	DNA replication SAAS SAAS004013
Cellular component	Cytoplasm SAAS SAAS004013
Molecular function	DNA-directed DNA polymerase SAAS SAAS004013 Nucleotidyltransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA replication Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	3'-5' exonuclease activity Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA-directed DNA polymerase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A4X5W1 [UniParc]. Last modified May 29, 2007. Version 1. Checksum: 37D6A61E4CEB66D2	FASTA	1,177	129,694
	10 20 30 40 50 60 MGDSFAHLHV HTEYSMLDGA ARLKDLFAEV NRQGMPAVAM TDHGNMHGAN DFYKQAMAAG 70 80 90 100 110 120 VKPILGIEAY VAPESRFHKK RVRWGRPEQK SDDVSGSGGY THMTIWAKNK VGLHNLFKLT 130 140 150 160 170 180 SRSFTEGFFV KWPRMDTELL AEHSEGLIAT TGCPSGEVQT RLRLDQYDEA LKAAAKYQDI 190 200 210 220 230 240 FGKENFFLEV MDHGIDIERR VRQELAEISH KLDIPPVVTN DSHYTYQAQS EAHDVLLCVQ 250 260 270 280 290 300 TAANVADPNR FRFDGSGYYI KSADEMRGVD SSELWRAGCR NTLLVAEMVD PAGMFDFRNL 310 320 330 340 350 360 MPRFPVPEGE TDESWFRKET FKGLARRFPN GVPETHLKQA EYELGVIIQM GFPSYFLVVA 370 380 390 400 410 420 DFIQWAKGEG IAVGPGRGSA AGSLVAYALG ITDLDPLPHG LIFERFLNPE RVSMPDVDID 430 440 450 460 470 480 FDERRRGEVI KYVTEKWGED KVAQIATFGT IKAKAAIKDS ARVLGYPYAV GDRITKAMPP 490 500 510 520 530 540 AVMGKDIPLT GIFDPQHSRY AEAGEIRGLY ESDPDVKKVI DTARGIEGLI RQTGVHAAGV 550 560 570 580 590 600 IMSAEPIVDH IPLMRRDADG AIITQFDYPT CESLGLLKMD FLGLRNLTII DDALKNIESN 610 620 630 640 650 660 HGRTVDLLQL PLDDTATYEL LSRGDTLGVF QLDGGPMRSL LRTMKPDNFE DISAVLALYR 670 680 690 700 710 720 PGPMGANSHT NYALRKNGLQ EITPIHPELA EPLEEILGPT YGLIVYQEQV QRAAQVLAGY 730 740 750 760 770 780 SLGKADLLRR AMGKKKKEVL DKEFVPFRDG MRANDYSDEA IQTLWDILVP FADYAFNKAH 790 800 810 820 830 840 TAGYGLVSYW TGYLKANYPA EYMAALLTSV GDDKDKMALY LSECRRMGIQ VLPPDVNTSA 850 860 870 880 890 900 GPFTPVGRDI RFGLAAIRNV GANVVSAIMR CRGEKGAYTD FYDFLSKVEA VVCNKKTIES 910 920 930 940 950 960 LIKAGAFDSL DHSRRGLLAV HADAIDAYAD VKRKEAVGQY DLFGAGFADS DAGQSTTVMP 970 980 990 1000 1010 1020 VIAEGEWDKR EKLAFEREML GLYVSDHPLF GLEHVLGAAA DTTIAALSEE GTVPDGTVVT 1030 1040 1050 1060 1070 1080 LAGILSGVQR RVTKQGRAWA SATLEDLAGG VETLFFPNTY EVIGEYIAED AIVVVKGRVD 1090 1100 1110 1120 1130 1140 RRDDTPRIMA MDMSIPDVSS NSANKPVTLT IPVTRCTPPL VERLKETLVL HPGDAEVHVK 1150 1160 1170 LLNGSKVTRL RLGPFRVAPT TALMADLKTV LGPANVG

References

[1]

"Complete sequence of Salinispora tropica CNB-440." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Sun H., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Jensen P.R., Moore B.S., Udwary D.W., Richardson P. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000667 Genomic DNA. Translation: ABP54261.1.
RefSeq	YP_001158639.1. NC_009380.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A4X5W1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5058257.
GenomeReviews	Gene locus Strop_1798 in contig CP000667_GR.
KEGG	stp:Strop_1798.
PATRIC	23442598. VBISalTro43511_1845.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0587.
HOGENOM	HBG734490.
OMA	RVLQMPY.
PhylomeDB	A4X5W1.
ProtClustDB	PRK05673.
Enzyme and pathway databases
BioCyc	STRO369723:STROP_1798-MONOMER.
Family and domain databases
InterPro	IPR011708. DNA_pol3_alpha. IPR004365. NA-bd_OB_tRNA-helicase. IPR004013. PHP_C. IPR003141. Pol/His_phosphatase_N. IPR016195. Pol/histidinol_Pase-like. IPR004805. PolC_alpha. [Graphical view]
KO	K02337.
Pfam	PF07733. DNA_pol3_alpha. 1 hit. PF02811. PHP. 1 hit. PF01336. tRNA_anti. 1 hit. [Graphical view]
SMART	SM00481. POLIIIAc. 1 hit. [Graphical view]
SUPFAM	SSF89550. PHP-like. 1 hit.
TIGRFAMs	TIGR00594. Polc. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A4X5W1_SALTO

Accession

Primary (citable) accession number: A4X5W1

Entry history

Integrated into UniProtKB/TrEMBL:	May 29, 2007
Last sequence update:	May 29, 2007
Last modified:	December 14, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)