A4X4F7 (A4X4F7_SALTO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
RNAse III EMBL ABP53757.1
EC=3.1.26.3 EMBL ABP53757.1

Gene names

Ordered Locus Names:

Strop_1287

Organism

Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) [Complete proteome] [HAMAP] EMBL ABP53757.1

Taxonomic identifier

369723 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micromonosporineae › Micromonosporaceae › Salinispora

Protein attributes

Sequence length	252 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABP53757.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	RNA processing Inferred from electronic annotation. Source: InterPro rRNA catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	double-stranded RNA binding Inferred from electronic annotation. Source: InterPro ribonuclease III activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A4X4F7 [UniParc]. Last modified May 29, 2007. Version 1. Checksum: 1FF5C88DE229CBD4	FASTA	252	26,693
	10 20 30 40 50 60 MSIDKRRRPV VGHLEAAFGV ALDPELLERA LTHRSYAYEN GGLPTNERLE FLGDSVLGVV 70 80 90 100 110 120 ITTALFHNHP DLPEGQLAKL RASVVNMRAL AEVARGLGPT GLGPYLLLGK GEESTGGRDK 130 140 150 160 170 180 ASILADTLEA LLGAIYLESG LETVATVIHR LFDPLMAESA GRGAALDWKT SLQELTAAQG 190 200 210 220 230 240 LGVPEYRIEG TGPDHLKTFT AWVVVAGRRY GGAEGRSKKE AEQRAAEAAW RTLTEQAEQE 250 PASAGSGAAG SA

References

[1]

"Complete sequence of Salinispora tropica CNB-440." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Sun H., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Jensen P.R., Moore B.S., Udwary D.W., Richardson P. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000667 Genomic DNA. Translation: ABP53757.1.
RefSeq	YP_001158135.1. NC_009380.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A4X4F7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5057740.
GenomeReviews	Gene locus Strop_1287 in contig CP000667_GR.
KEGG	stp:Strop_1287.
PATRIC	23441518. VBISalTro43511_1311.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0571.
HOGENOM	HBG744556.
OMA	THRSHSK.
PhylomeDB	A4X4F7.
ProtClustDB	CLSK967923.
Enzyme and pathway databases
BioCyc	STRO369723:STROP_1287-MONOMER.
Family and domain databases
HAMAP	MF_00104. RNase_III. [Tree]
InterPro	IPR001159. Ds-RNA-bd. IPR014720. dsRNA-bd-like. IPR000999. RNase_III. IPR011907. RNase_III_bac. [Graphical view]
Gene3D	G3DSA:3.30.160.20. dsRNA-bd-like. 1 hit. G3DSA:1.10.1520.10. RNase_III. 1 hit.
KO	K03685.
PANTHER	PTHR11207. PTHR11207. 1 hit.
Pfam	PF00035. dsrm. 1 hit. PF00636. Ribonuclease_3. 1 hit. [Graphical view]
SMART	SM00358. DSRM. 1 hit. SM00535. RIBOc. 1 hit. [Graphical view]
SUPFAM	SSF69065. RNase_III. 1 hit.
TIGRFAMs	TIGR02191. RNaseIII. 1 hit.
PROSITE	PS50137. DS_RBD. 1 hit. PS00517. RNASE_3_1. 1 hit. PS50142. RNASE_3_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A4X4F7_SALTO

Accession

Primary (citable) accession number: A4X4F7

Entry history

Integrated into UniProtKB/TrEMBL:	May 29, 2007
Last sequence update:	May 29, 2007
Last modified:	January 25, 2012
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)