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A4X491

- GATB_SALTO

UniProt

A4X491 - GATB_SALTO

Protein

Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B

Gene

gatB

Organism
Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 53 (01 Oct 2014)
      Sequence version 1 (29 May 2007)
      Previous versions | rss
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    Functioni

    Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).UniRule annotation

    Catalytic activityi

    ATP + L-glutamyl-tRNA(Gln) + L-glutamine = ADP + phosphate + L-glutaminyl-tRNA(Gln) + L-glutamate.UniRule annotation
    ATP + L-aspartyl-tRNA(Asn) + L-glutamine = ADP + phosphate + L-asparaginyl-tRNA(Asn) + L-glutamate.UniRule annotation

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. carbon-nitrogen ligase activity, with glutamine as amido-N-donor Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-KW

    Keywords - Molecular functioni

    Ligase

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciSTRO369723:GI49-1242-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit BUniRule annotation (EC:6.3.5.-UniRule annotation)
    Short name:
    Asp/Glu-ADT subunit BUniRule annotation
    Gene namesi
    Name:gatBUniRule annotation
    Ordered Locus Names:Strop_1221
    OrganismiSalinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)
    Taxonomic identifieri369723 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeSalinispora
    ProteomesiUP000000235: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 499499Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit BPRO_1000095242Add
    BLAST

    Interactioni

    Subunit structurei

    Heterotrimer of A, B and C subunits.UniRule annotation

    Protein-protein interaction databases

    STRINGi369723.Strop_1221.

    Structurei

    3D structure databases

    ProteinModelPortaliA4X491.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the GatB/GatE family. GatB subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0064.
    HOGENOMiHOG000223742.
    KOiK02434.
    OMAiNCSIAEW.
    OrthoDBiEOG6RJV5B.

    Family and domain databases

    Gene3Di1.10.10.410. 1 hit.
    HAMAPiMF_00121. GatB.
    InterProiIPR004413. Apn/Gln-ADT_bsu.
    IPR017959. Asn/Gln-tRNA_amidoTrfase_suB/E.
    IPR006075. Asn/Gln-tRNA_Trfase_suB/E_cat.
    IPR018027. Asn/Gln_amidotransferase.
    IPR003789. Asn/Gln_tRNA_amidoTrfrase-rel.
    IPR023168. GatB_Yqey_C.
    IPR017958. Gln-tRNA_amidoTrfase_suB_CS.
    [Graphical view]
    PANTHERiPTHR11659. PTHR11659. 1 hit.
    PfamiPF02934. GatB_N. 1 hit.
    PF02637. GatB_Yqey. 1 hit.
    [Graphical view]
    SMARTiSM00845. GatB_Yqey. 1 hit.
    [Graphical view]
    SUPFAMiSSF89095. SSF89095. 1 hit.
    TIGRFAMsiTIGR00133. gatB. 1 hit.
    PROSITEiPS01234. GATB. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A4X491-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTTTLPAYDE VVARYEPVIG LETHVELGTN TKMFCGCPTD FGGAPNTRVC    50
    PVCLGLPGSL PVANRAAVEA TIRIGLALNC SIAEWCRFAR KNYYYPDMPK 100
    NYQISQYDEP LCVDGYLDVE VDGEPVRISI ERVHMEEDTG KTLHVGGATG 150
    RIHGATESLV DYNRAGIPLV EIVTKPIPGA GAMAPEVARA YVTELRDVLR 200
    SLGVSDVRME EGSLRCDVNT SLNLPGEQWG TRTETKNVNS LRSVERAVRS 250
    EMIRQASVLE GGGRITQETR HFHEDTGDTT SGRSKETATD YRYFPEPDLV 300
    PVAPDPTWVA ELKAALPELP RLHRRRLQQE WGLSDLDMQS ILNAGAVELI 350
    EATIAAGATP TAARKWWLGE LSRRANEAGV ELADIGATPE QVAELQGLVD 400
    AGKLTDKLAR TVLEHVVAGE GSPAKIMADR NLEVVSDTGA LTAAVDEAIA 450
    ANPAIADKVR GGKVAAAGAL VGAVMKTTRG QADAKTVREL ILERLGVQG 499
    Length:499
    Mass (Da):53,726
    Last modified:May 29, 2007 - v1
    Checksum:i2DCB1A5CAB3130F7
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000667 Genomic DNA. Translation: ABP53691.1.
    RefSeqiYP_001158069.1. NC_009380.1.

    Genome annotation databases

    EnsemblBacteriaiABP53691; ABP53691; Strop_1221.
    GeneIDi5057671.
    KEGGistp:Strop_1221.
    PATRICi23441378. VBISalTro43511_1244.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000667 Genomic DNA. Translation: ABP53691.1 .
    RefSeqi YP_001158069.1. NC_009380.1.

    3D structure databases

    ProteinModelPortali A4X491.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 369723.Strop_1221.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABP53691 ; ABP53691 ; Strop_1221 .
    GeneIDi 5057671.
    KEGGi stp:Strop_1221.
    PATRICi 23441378. VBISalTro43511_1244.

    Phylogenomic databases

    eggNOGi COG0064.
    HOGENOMi HOG000223742.
    KOi K02434.
    OMAi NCSIAEW.
    OrthoDBi EOG6RJV5B.

    Enzyme and pathway databases

    BioCyci STRO369723:GI49-1242-MONOMER.

    Family and domain databases

    Gene3Di 1.10.10.410. 1 hit.
    HAMAPi MF_00121. GatB.
    InterProi IPR004413. Apn/Gln-ADT_bsu.
    IPR017959. Asn/Gln-tRNA_amidoTrfase_suB/E.
    IPR006075. Asn/Gln-tRNA_Trfase_suB/E_cat.
    IPR018027. Asn/Gln_amidotransferase.
    IPR003789. Asn/Gln_tRNA_amidoTrfrase-rel.
    IPR023168. GatB_Yqey_C.
    IPR017958. Gln-tRNA_amidoTrfase_suB_CS.
    [Graphical view ]
    PANTHERi PTHR11659. PTHR11659. 1 hit.
    Pfami PF02934. GatB_N. 1 hit.
    PF02637. GatB_Yqey. 1 hit.
    [Graphical view ]
    SMARTi SM00845. GatB_Yqey. 1 hit.
    [Graphical view ]
    SUPFAMi SSF89095. SSF89095. 1 hit.
    TIGRFAMsi TIGR00133. gatB. 1 hit.
    PROSITEi PS01234. GATB. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Salinispora tropica CNB-440."
      Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Sun H., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Jensen P.R., Moore B.S., Udwary D.W., Richardson P.
      Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC BAA-916 / DSM 44818 / CNB-440.

    Entry informationi

    Entry nameiGATB_SALTO
    AccessioniPrimary (citable) accession number: A4X491
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 24, 2009
    Last sequence update: May 29, 2007
    Last modified: October 1, 2014
    This is version 53 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3