A4X339 (A4X339_SALTO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Thymidine phosphorylase EMBL ABP53289.1
EC=2.4.2.4 EMBL ABP53289.1

Gene names

Ordered Locus Names:

Strop_0812

Organism

Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) [Complete proteome] [HAMAP] EMBL ABP53289.1

Taxonomic identifier

369723 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micromonosporineae › Micromonosporaceae › Salinispora

Protein attributes

Sequence length	426 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosyltransferase EMBL ABP53289.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	pyrimidine base metabolic process Inferred from electronic annotation. Source: InterPro pyrimidine nucleoside metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	pyrimidine-nucleoside phosphorylase activity Inferred from electronic annotation. Source: InterPro thymidine phosphorylase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A4X339 [UniParc]. Last modified May 29, 2007. Version 1. Checksum: 90588DBB48FA6F58	FASTA	426	44,038
	10 20 30 40 50 60 MADFAAVDVI RAKRDGAALS DAQVDWVVDA YTRGQVADEQ MAALAMAILL NGMTAPEIAR 70 80 90 100 110 120 WTAAMISSGE RLDLSAVDRP TVDKHSTGGV GDKITLPLTP LVAACGAAVP QLSGRGLGHT 130 140 150 160 170 180 GGTLDKLESI PGWRASLGNE EFIAQLRGVG AVICAAGAGL APADRKLYAL RDVTGTVEAI 190 200 210 220 230 240 PLIASSIMSK KIAEGTGALV LDVKVGSGAF MKSVDQARQL ARTMVELGGA QGVHTVALLT 250 260 270 280 290 300 DMSTPLGLAI GNAVEVTESV EVLAGGGPAD VVELTLALAR EMLDAAGLPD ADPAAALRDG 310 320 330 340 350 360 RAMDAWRAML RAQGGDPDAQ LPTAREVEVV RADESGVVAQ VDAYGMGVAA WRLGAGRARK 370 380 390 400 410 420 EDAVSAPAGV LLHKRPGDPV RAGEPLFELR AEDADRIPEA RKEAVRAVRI AASAPEKRPL VLERIS

References

[1]

"Complete sequence of Salinispora tropica CNB-440." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Sun H., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Jensen P.R., Moore B.S., Udwary D.W., Richardson P. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000667 Genomic DNA. Translation: ABP53289.1.
RefSeq	YP_001157667.1. NC_009380.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A4X339.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5057255.
GenomeReviews	Gene locus Strop_0812 in contig CP000667_GR.
KEGG	stp:Strop_0812.
PATRIC	23440525. VBISalTro43511_0824.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0213.
HOGENOM	HBG288505.
OMA	DMSTPLG.
PhylomeDB	A4X339.
ProtClustDB	PRK05820.
Enzyme and pathway databases
BioCyc	STRO369723:STROP_0812-MONOMER.
Family and domain databases
InterPro	IPR000312. Glycosyl_Trfase_fam3. IPR017459. Glycosyl_Trfase_fam3_N. IPR020072. Glycosyl_Trfase_fam3_subgr_N. IPR013102. PYNP_C. IPR018090. Pyrmidine_PPas_bac/euk. IPR000053. Pyrmidine_PPase. IPR017872. Pyrmidine_PPase_CS. [Graphical view]
Gene3D	G3DSA:3.90.1170.30. G3DSA:3.90.1170.30. 1 hit. G3DSA:1.20.970.10. Glyco_trans_3. 1 hit. G3DSA:3.40.1030.10. Glyco_trans_3. 1 hit.
KO	K00758.
PANTHER	PTHR10515. Pyrmidine_PPase. 1 hit.
Pfam	PF02885. Glycos_trans_3N. 1 hit. PF00591. Glycos_transf_3. 1 hit. PF07831. PYNP_C. 1 hit. [Graphical view]
PIRSF	PIRSF000478. TP_PyNP. 1 hit.
SMART	SM00941. PYNP_C. 1 hit. [Graphical view]
SUPFAM	SSF47648. Glyco_trans_3. 1 hit. SSF52418. Glyco_trans_3. 1 hit. SSF54680. PYNP_C. 1 hit.
TIGRFAMs	TIGR02644. Y_phosphoryl. 1 hit.
PROSITE	PS00647. THYMID_PHOSPHORYLASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A4X339_SALTO

Accession

Primary (citable) accession number: A4X339

Entry history

Integrated into UniProtKB/TrEMBL:	May 29, 2007
Last sequence update:	May 29, 2007
Last modified:	December 14, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)