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A4X329

- A4X329_SALTO

UniProt

A4X329 - A4X329_SALTO

Protein
Submitted name:

Transcriptional regulator, LacI family

Gene

Strop_0802

Organism
Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 49 (01 Oct 2014)
      Sequence version 1 (29 May 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-KW
    2. sequence-specific DNA binding transcription factor activity Source: InterPro

    GO - Biological processi

    1. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Biological processi

    Transcription, Transcription regulationUniRule annotationSAAS annotation

    Keywords - Ligandi

    DNA-bindingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciSTRO369723:GI49-816-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Transcriptional regulator, LacI familyImported
    Gene namesi
    Ordered Locus Names:Strop_0802Imported
    OrganismiSalinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)Imported
    Taxonomic identifieri369723 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeSalinispora
    ProteomesiUP000000235: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi369723.Strop_0802.

    Structurei

    3D structure databases

    ProteinModelPortaliA4X329.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains HTH lacI-type DNA-binding domain.SAAS annotation

    Phylogenomic databases

    eggNOGiCOG1609.
    HOGENOMiHOG000220179.
    KOiK01775.
    OMAiDSINEQQ.
    OrthoDBiEOG6SJJMM.

    Family and domain databases

    Gene3Di1.10.260.40. 1 hit.
    InterProiIPR010982. Lambda_DNA-bd_dom.
    IPR028082. Peripla_BP_I.
    IPR000843. Tscrpt_reg_HTH_LacI.
    [Graphical view]
    PfamiPF00356. LacI. 1 hit.
    [Graphical view]
    SMARTiSM00354. HTH_LACI. 1 hit.
    [Graphical view]
    SUPFAMiSSF47413. SSF47413. 1 hit.
    SSF53822. SSF53822. 1 hit.
    PROSITEiPS00356. HTH_LACI_1. 1 hit.
    PS50932. HTH_LACI_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A4X329-1 [UniParc]FASTAAdd to Basket

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    MRARLSDIAQ QAEVSEATVS RVLNDRPGVA PETRQAVLTA LDVLGYERPA    50
    RLRKRCAGLV GLVVPELDNP IFPAFAQIIE SALAPTGFTP VLCTQTPGGI 100
    REDEYVEMLL DRQVSGIVFV SGLHADTTAD HDRYRALIAR PLPVVMVNGY 150
    APNLRAPFIS CDDREAAELA VTHLVALGHR RIGLITGPDR FVPVQRKVAG 200
    YKAAMRYRTD VSDAELAELT ELSLFGVEGG EAAATRLLDR GVTGLVCGSD 250
    PMALGAIRAA RQRGLTVPRD ISVVGYDDSP LMAFTDPPLT TVRQPVAAMA 300
    IAAVRALVDE INGHAAPHSE YLFRPELVVR GSTAVAQTPD VDPGAPTPSP 350
    LAVSVQTPPS ARRDPARR 368
    Length:368
    Mass (Da):39,382
    Last modified:May 29, 2007 - v1
    Checksum:i3056B050712EE150
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000667 Genomic DNA. Translation: ABP53279.1.
    RefSeqiWP_011904713.1. NC_009380.1.
    YP_001157657.1. NC_009380.1.

    Genome annotation databases

    EnsemblBacteriaiABP53279; ABP53279; Strop_0802.
    GeneIDi5057245.
    KEGGistp:Strop_0802.
    PATRICi23440505. VBISalTro43511_0814.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000667 Genomic DNA. Translation: ABP53279.1 .
    RefSeqi WP_011904713.1. NC_009380.1.
    YP_001157657.1. NC_009380.1.

    3D structure databases

    ProteinModelPortali A4X329.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 369723.Strop_0802.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABP53279 ; ABP53279 ; Strop_0802 .
    GeneIDi 5057245.
    KEGGi stp:Strop_0802.
    PATRICi 23440505. VBISalTro43511_0814.

    Phylogenomic databases

    eggNOGi COG1609.
    HOGENOMi HOG000220179.
    KOi K01775.
    OMAi DSINEQQ.
    OrthoDBi EOG6SJJMM.

    Enzyme and pathway databases

    BioCyci STRO369723:GI49-816-MONOMER.

    Family and domain databases

    Gene3Di 1.10.260.40. 1 hit.
    InterProi IPR010982. Lambda_DNA-bd_dom.
    IPR028082. Peripla_BP_I.
    IPR000843. Tscrpt_reg_HTH_LacI.
    [Graphical view ]
    Pfami PF00356. LacI. 1 hit.
    [Graphical view ]
    SMARTi SM00354. HTH_LACI. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47413. SSF47413. 1 hit.
    SSF53822. SSF53822. 1 hit.
    PROSITEi PS00356. HTH_LACI_1. 1 hit.
    PS50932. HTH_LACI_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Salinispora tropica CNB-440."
      Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Sun H., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Jensen P.R., Moore B.S., Udwary D.W., Richardson P.
      Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC BAA-916 / DSM 44818 / CNB-440Imported.

    Entry informationi

    Entry nameiA4X329_SALTO
    AccessioniPrimary (citable) accession number: A4X329
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 29, 2007
    Last sequence update: May 29, 2007
    Last modified: October 1, 2014
    This is version 49 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3