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Protein
Submitted name:

Type II site-specific deoxyribonuclease

Gene

Strop_0105

Organism
Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciSTRO369723:GI49-109-MONOMER.

Protein family/group databases

REBASEi15127. StrCORF104P.

Names & Taxonomyi

Protein namesi
Submitted name:
Type II site-specific deoxyribonucleaseImported (EC:3.1.21.4Imported)
Gene namesi
Ordered Locus Names:Strop_0105Imported
OrganismiSalinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)Imported
Taxonomic identifieri369723 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicromonosporalesMicromonosporaceaeSalinispora
ProteomesiUP000000235 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi369723.Strop_0105.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG274694.
HOGENOMiHOG000015232.
KOiK01155.
OMAiDIAWETE.
OrthoDBiEOG6W71XN.

Family and domain databases

InterProiIPR009528. Restrct_endonuc_II_BsuBI_C.
[Graphical view]
PfamiPF06616. BsuBI_PstI_RE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A4X140-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSVVRKIEEA SQILTALGMD AERSNERSAQ TLLALLHLKS DDTWADSANP
60 70 80 90 100
MLGTRAIMDW IRDEYGRSYA ANTRETIRRF TLHQFADAFL IQQNPDQPTR
110 120 130 140 150
PVNSPKWNYQ VTSEALTVVK AFGTPDFDSV LSEYLTRKPG LKAQYATARA
160 170 180 190 200
RNRIPVTLPG GKPFTLSPGG QNVLIKQVVE EFCPQFTPGA EVLYVGDADA
210 220 230 240 250
KWALFEAERL AEFGVSIDQH GKMPDLVVYL PDKDWIVLVE AASSHGPVDA
260 270 280 290 300
KRHGELAALF KGATPGLVYI SCFPDRREMR KYLHRIAWET EVWCAEDPTH
310
LIHFNGERFL GPYS
Length:314
Mass (Da):35,281
Last modified:May 29, 2007 - v1
Checksum:i3E947A3DD3E4D1FA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000667 Genomic DNA. Translation: ABP52590.1.
RefSeqiWP_011904027.1. NC_009380.1.

Genome annotation databases

EnsemblBacteriaiABP52590; ABP52590; Strop_0105.
GeneIDi5056538.
KEGGistp:Strop_0105.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000667 Genomic DNA. Translation: ABP52590.1.
RefSeqiWP_011904027.1. NC_009380.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi369723.Strop_0105.

Protein family/group databases

REBASEi15127. StrCORF104P.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABP52590; ABP52590; Strop_0105.
GeneIDi5056538.
KEGGistp:Strop_0105.

Phylogenomic databases

eggNOGiNOG274694.
HOGENOMiHOG000015232.
KOiK01155.
OMAiDIAWETE.
OrthoDBiEOG6W71XN.

Enzyme and pathway databases

BioCyciSTRO369723:GI49-109-MONOMER.

Family and domain databases

InterProiIPR009528. Restrct_endonuc_II_BsuBI_C.
[Graphical view]
PfamiPF06616. BsuBI_PstI_RE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Salinispora tropica CNB-440."
    Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Sun H., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Jensen P.R., Moore B.S., Udwary D.W., Richardson P.
    Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-916 / DSM 44818 / CNB-440Imported.

Entry informationi

Entry nameiA4X140_SALTO
AccessioniPrimary (citable) accession number: A4X140
Entry historyi
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: July 22, 2015
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.