A4WXM0 (A4WXM0_RHOS5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Selenide, water dikinase HAMAP MF_00625
EC=2.7.9.3 HAMAP MF_00625

Alternative name(s):
Selenium donor protein HAMAP MF_00625
Selenophosphate synthase HAMAP MF_00625

Gene names

Name:	selD HAMAP MF_00625
Ordered Locus Names:	Rsph17025_3250

Encoded on

Plasmid pRSPA01 EMBL ABP72134.1

Organism

Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) [Complete proteome] [HAMAP]

Taxonomic identifier

349102 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Rhodobacter

Protein attributes

Sequence length	351 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Synthesizes selenophosphate from selenide and ATP By similarity. HAMAP MF_00625 SAAS SAAS023061
Catalytic activity	ATP + selenide + H2O = AMP + selenophosphate + phosphate. HAMAP MF_00625 SAAS SAAS023061
Cofactor	Magnesium By similarity. HAMAP MF_00625 SAAS SAAS023061
Sequence similarities	Belongs to the selenophosphate synthase 1 family. Class I subfamily. HAMAP MF_00625

Ontologies

Keywords
Ligand	ATP-binding HAMAP MF_00625 SAAS SAAS023061 Magnesium HAMAP MF_00625 SAAS SAAS023061 Nucleotide-binding Selenium HAMAP MF_00625 SAAS SAAS023061
Molecular function	Kinase HAMAP MF_00625 SAAS SAAS023061 Transferase
Technical term	Complete proteome Plasmid EMBL ABP72134.1
Gene Ontology (GO)
Molecular function	ATP binding Inferred from electronic annotation. Source: HAMAP magnesium ion binding Inferred from electronic annotation. Source: HAMAP selenide, water dikinase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	Nucleotide binding	233 – 239	7	ATP By similarity HAMAP MF_00625
Sites
	Active site	20	1	By similarity HAMAP MF_00625
	Site	23	1	Important for catalytic activity By similarity HAMAP MF_00625

Sequences

	Sequence		Length	Mass (Da)
	A4WXM0 [UniParc]. Last modified May 29, 2007. Version 1. Checksum: 7E03046FADEA4778	FASTA	351	35,958
	10 20 30 40 50 60 MTDRPPTEPR LTSLAHGGGC GCKIAPGILS DLLRAAPALP VPEDLLVGTA TSDDAAVWRL 70 80 90 100 110 120 NDEQALVATT DFFMPIVDDP FDFGRIAATN AISDVYAMGG RPIMALALVG MPINVLSRET 130 140 150 160 170 180 IGRILEGGAT ACAAAGIPVA GGHTIDSVEP IYGLVALGLV HPERVRSNAG ARPGDRLILG 190 200 210 220 230 240 KPIGTGILSA ALKKGELDAA GYAEMIATTT RLNTPGPDLA ALAGVHALTD VTGFGLGGHA 250 260 270 280 290 300 IEMARGAGCE LRIDWDRVPV MPPVRGLVGR GFVTGASGRN WDSYGAGVAL PEDFPPGERA 310 320 330 340 350 LLTDPQTSGG LLVSCAEDAV AEVLAIFARH GFEAATEIGG VAEGPARVVL R

References

[1]

"Complete sequence of plasmid pRSPA01 of Rhodobacter sphaeroides ATCC 17025." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Kim E., Richardson P., Mackenzie C., Choudhary M., Donohue T.J., Kaplan S. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 17025 / ATH 2.4.3.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000662 Genomic DNA. Translation: ABP72134.1.
RefSeq	YP_001169439.1. NC_009429.1.
3D structure databases
ProteinModelPortal	A4WXM0.
ModBase	Search...
Protein-protein interaction databases
STRING	A4WXM0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5085999.
GenomeReviews	Gene locus Rsph17025_3250 in contig CP000662_GR.
KEGG	rsq:Rsph17025_3250.
PATRIC	23164941. VBIRhoSph94549_3370.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0709.
HOGENOM	HBG383791.
OMA	MMAIAIL.
ProtClustDB	PRK00943.
Enzyme and pathway databases
BioCyc	RSPH349102:RSPH17025_3250-MONOMER.
Family and domain databases
HAMAP	MF_00625. SelD. [Tree]
InterPro	IPR000728. AIR_synth. IPR010918. AIR_synth_C. IPR016188. PurM_N-like. IPR004536. SelD. IPR023061. SelD_I. [Graphical view]
KO	K01008.
Pfam	PF00586. AIRS. 1 hit. PF02769. AIRS_C. 1 hit. [Graphical view]
PIRSF	PIRSF036407. Selenphspht_syn. 1 hit.
SUPFAM	SSF56042. AIR_synth_C. 1 hit. SSF55326. PurM_N-like. 1 hit.
TIGRFAMs	TIGR00476. SelD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A4WXM0_RHOS5

Accession

Primary (citable) accession number: A4WXM0

Entry history

Integrated into UniProtKB/TrEMBL:	May 29, 2007
Last sequence update:	May 29, 2007
Last modified:	December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)