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A4WSU8

- A4WSU8_RHOS5

UniProt

A4WSU8 - A4WSU8_RHOS5

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Rsph17025_1569

Organism
Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 51 (01 Oct 2014)
      Sequence version 1 (29 May 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciRSPH349102:GHE1-2896-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Rsph17025_1569Imported
    OrganismiRhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3)Imported
    Taxonomic identifieri349102 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRhodobacter
    ProteomesiUP000000234: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi349102.Rsph17025_1569.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000036007.
    KOiK01971.
    OMAiKSASTHN.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A4WSU8-1 [UniParc]FASTAAdd to Basket

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    MKRFATLFDL LDRTTRTSAK VAALADYFRD APEEDRVWTI ALLSGRRPKR    50
    SVNATELRSW AAEAAGLPVW LAEEVHPIVG DLAETISLIL PEPTRASDRT 100
    LDDWMRMLIA LTGRPAEERR AAILDAWDRL TTPERFLFNK LITGGFRMGV 150
    SQGLMTRALA QATGVDEAVL AHRLMGDWNP ARIRFETLIG AHDPEADASK 200
    PYPFALASPV EDVAALGPPS DWLAEWKWDG IRGQLVNRAG AFALWSRGEE 250
    LVTDRFPDLA PLRDFLPPGL VIDAEVLAWG GEAPLPFAAL QKRIGRLTVP 300
    KKLLAEAPAH LLAYDLLEEN GEDLRAAPLA HRRARLEAVL AALPPGLPIA 350
    PSPLVSFDDW ETLGQIRATA RARIAEGLML KRASSPYFVG RKRGDWWKWK 400
    LDPYTVDAVM LYAQQGAGRR ATLFTDFTFG VRDGDDLVPF TKAYSGLTDA 450
    EFRQITDWVR KNTLERFGPV RRVPPELVFE LAFEGIQASP RHKSGIALRF 500
    PRMVRWRKDK PAAEIDTLES LRALLASTGA AP 532
    Length:532
    Mass (Da):59,183
    Last modified:May 29, 2007 - v1
    Checksum:i28BA89EE104F00EB
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000661 Genomic DNA. Translation: ABP70462.1.
    RefSeqiWP_011908591.1. NC_009428.1.
    YP_001167767.1. NC_009428.1.

    Genome annotation databases

    EnsemblBacteriaiABP70462; ABP70462; Rsph17025_1569.
    GeneIDi5082380.
    KEGGirsq:Rsph17025_1569.
    PATRICi23161386. VBIRhoSph94549_1617.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000661 Genomic DNA. Translation: ABP70462.1 .
    RefSeqi WP_011908591.1. NC_009428.1.
    YP_001167767.1. NC_009428.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 349102.Rsph17025_1569.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABP70462 ; ABP70462 ; Rsph17025_1569 .
    GeneIDi 5082380.
    KEGGi rsq:Rsph17025_1569.
    PATRICi 23161386. VBIRhoSph94549_1617.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000036007.
    KOi K01971.
    OMAi KSASTHN.
    OrthoDBi EOG6Q8HXT.

    Enzyme and pathway databases

    BioCyci RSPH349102:GHE1-2896-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 17025 / ATH 2.4.3Imported.

    Entry informationi

    Entry nameiA4WSU8_RHOS5
    AccessioniPrimary (citable) accession number: A4WSU8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 29, 2007
    Last sequence update: May 29, 2007
    Last modified: October 1, 2014
    This is version 51 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3