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A4WSU8

- A4WSU8_RHOS5

UniProt

A4WSU8 - A4WSU8_RHOS5

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Protein
Submitted name: ATP dependent DNA ligase
Gene
Rsph17025_1569
Organism
Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciRSPH349102:GHE1-2896-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Rsph17025_1569Imported
OrganismiRhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3)Imported
Taxonomic identifieri349102 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRhodobacter
ProteomesiUP000000234: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi349102.Rsph17025_1569.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiKSASTHN.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A4WSU8-1 [UniParc]FASTAAdd to Basket

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MKRFATLFDL LDRTTRTSAK VAALADYFRD APEEDRVWTI ALLSGRRPKR    50
SVNATELRSW AAEAAGLPVW LAEEVHPIVG DLAETISLIL PEPTRASDRT 100
LDDWMRMLIA LTGRPAEERR AAILDAWDRL TTPERFLFNK LITGGFRMGV 150
SQGLMTRALA QATGVDEAVL AHRLMGDWNP ARIRFETLIG AHDPEADASK 200
PYPFALASPV EDVAALGPPS DWLAEWKWDG IRGQLVNRAG AFALWSRGEE 250
LVTDRFPDLA PLRDFLPPGL VIDAEVLAWG GEAPLPFAAL QKRIGRLTVP 300
KKLLAEAPAH LLAYDLLEEN GEDLRAAPLA HRRARLEAVL AALPPGLPIA 350
PSPLVSFDDW ETLGQIRATA RARIAEGLML KRASSPYFVG RKRGDWWKWK 400
LDPYTVDAVM LYAQQGAGRR ATLFTDFTFG VRDGDDLVPF TKAYSGLTDA 450
EFRQITDWVR KNTLERFGPV RRVPPELVFE LAFEGIQASP RHKSGIALRF 500
PRMVRWRKDK PAAEIDTLES LRALLASTGA AP 532
Length:532
Mass (Da):59,183
Last modified:May 29, 2007 - v1
Checksum:i28BA89EE104F00EB
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000661 Genomic DNA. Translation: ABP70462.1.
RefSeqiWP_011908591.1. NC_009428.1.
YP_001167767.1. NC_009428.1.

Genome annotation databases

EnsemblBacteriaiABP70462; ABP70462; Rsph17025_1569.
GeneIDi5082380.
KEGGirsq:Rsph17025_1569.
PATRICi23161386. VBIRhoSph94549_1617.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000661 Genomic DNA. Translation: ABP70462.1 .
RefSeqi WP_011908591.1. NC_009428.1.
YP_001167767.1. NC_009428.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 349102.Rsph17025_1569.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABP70462 ; ABP70462 ; Rsph17025_1569 .
GeneIDi 5082380.
KEGGi rsq:Rsph17025_1569.
PATRICi 23161386. VBIRhoSph94549_1617.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000036007.
KOi K01971.
OMAi KSASTHN.
OrthoDBi EOG6Q8HXT.

Enzyme and pathway databases

BioCyci RSPH349102:GHE1-2896-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 17025 / ATH 2.4.3.

Entry informationi

Entry nameiA4WSU8_RHOS5
AccessioniPrimary (citable) accession number: A4WSU8
Entry historyi
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: September 3, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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