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Protein

Protein TolB

Gene

tolB

Organism
Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Involved in the TonB-independent uptake of proteins.UniRule annotation

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Protein transport, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Protein TolBUniRule annotation
Gene namesi
Name:tolBUniRule annotation
Ordered Locus Names:Rsph17025_0562
OrganismiRhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3)
Taxonomic identifieri349102 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRhodobacter
Proteomesi
  • UP000000234 Componenti: Chromosome

Subcellular locationi

  • Periplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Periplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 26UniRule annotationAdd BLAST26
ChainiPRO_500023862327 – 444Protein TolBAdd BLAST418

Interactioni

Protein-protein interaction databases

STRINGi349102.Rsph17025_0562.

Structurei

3D structure databases

ProteinModelPortaliA4WQ04.
SMRiA4WQ04.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the TolB family.UniRule annotation

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4107R6Y. Bacteria.
COG0823. LUCA.
HOGENOMiHOG000004097.
KOiK03641.
OMAiVREPSWG.
OrthoDBiPOG091H04CX.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
3.40.50.10070. 1 hit.
HAMAPiMF_00671. TolB. 1 hit.
InterProiIPR011659. PD40.
IPR014167. Tol-Pal_propeller_TolB.
IPR007195. TolB_N.
IPR015943. WD40/YVTN_repeat-like_dom.
[Graphical view]
PfamiPF07676. PD40. 5 hits.
PF04052. TolB_N. 1 hit.
[Graphical view]
SUPFAMiSSF52964. SSF52964. 1 hit.
TIGRFAMsiTIGR02800. propeller_TolB. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A4WQ04-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNLFRSLAPM GLALALLLPA AAPALAQQGP LRIQITEGVI EPLPFAVPNF
60 70 80 90 100
VAETSGASQL AQDMARVIAA DLSGTGLFRE IPASAHISRV TSFDAPIAYN
110 120 130 140 150
DWKAINAQAL ITGSVSASGD RVVVKFRLHD VFSDQPLGEG LQFAGSASGW
160 170 180 190 200
RRMAHKVADV AYSRITGEGG YFDSRVVFVS ETGPKNARAK RLAVMDYDGA
210 220 230 240 250
NVQYLTDSSS IVLAPRFSPT GDRILFTSYS TGFPRIYLMD VGSLATRSLA
260 270 280 290 300
EQPGTMTFAP RFAPDGRTVA FSLEQGGNTD IYTLDTASGT RRQLTNSPSI
310 320 330 340 350
ETAPSYSPDG SQIVFESDRS GGQQLYIMPA GGGEPRRISN GAGRYGTPVW
360 370 380 390 400
SPRGDLIAFT KQHQGRFHIG VMRTDGSEER LLTASFLDEG PTWAPNGRVL
410 420 430 440
MFTREGAGAG GQPALYSVDI SGRNLKKVPL SVPASDPAWS PLLP
Length:444
Mass (Da):47,378
Last modified:May 29, 2007 - v1
Checksum:iAB0BC42C4B695B20
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000661 Genomic DNA. Translation: ABP69468.1.
RefSeqiWP_011907618.1. NC_009428.1.

Genome annotation databases

EnsemblBacteriaiABP69468; ABP69468; Rsph17025_0562.
KEGGirsq:Rsph17025_0562.
PATRICi23159257. VBIRhoSph94549_0569.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000661 Genomic DNA. Translation: ABP69468.1.
RefSeqiWP_011907618.1. NC_009428.1.

3D structure databases

ProteinModelPortaliA4WQ04.
SMRiA4WQ04.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi349102.Rsph17025_0562.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABP69468; ABP69468; Rsph17025_0562.
KEGGirsq:Rsph17025_0562.
PATRICi23159257. VBIRhoSph94549_0569.

Phylogenomic databases

eggNOGiENOG4107R6Y. Bacteria.
COG0823. LUCA.
HOGENOMiHOG000004097.
KOiK03641.
OMAiVREPSWG.
OrthoDBiPOG091H04CX.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
3.40.50.10070. 1 hit.
HAMAPiMF_00671. TolB. 1 hit.
InterProiIPR011659. PD40.
IPR014167. Tol-Pal_propeller_TolB.
IPR007195. TolB_N.
IPR015943. WD40/YVTN_repeat-like_dom.
[Graphical view]
PfamiPF07676. PD40. 5 hits.
PF04052. TolB_N. 1 hit.
[Graphical view]
SUPFAMiSSF52964. SSF52964. 1 hit.
TIGRFAMsiTIGR02800. propeller_TolB. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiTOLB_RHOS5
AccessioniPrimary (citable) accession number: A4WQ04
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: May 29, 2007
Last modified: November 2, 2016
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.