A4WN93 (Y2316_PYRAR) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
UPF0290 protein Pars_2316

Gene names

Ordered Locus Names:

Pars_2316

Organism

Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) [Complete proteome] [HAMAP]

Taxonomic identifier

340102 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Crenarchaeota › Thermoprotei › Thermoproteales › Thermoproteaceae › Pyrobaculum › Pyrobaculum arsenaticum

Protein attributes

Sequence length	164 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subcellular location	Cell membrane; Multi-pass membrane protein Potential HAMAP-Rule MF_01117.
Sequence similarities	Belongs to the UPF0290 family.

Ontologies

Keywords
Cellular component	Cell membrane Membrane
Domain	Transmembrane Transmembrane helix
Technical term	Complete proteome
Gene Ontology (GO)
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: UniProtKB-SubCell
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 164	164	UPF0290 protein Pars_2316 HAMAP-Rule MF_01117		PRO_0000298285
Regions
	Transmembrane	3 – 23	21	Helical; Potential
	Transmembrane	53 – 73	21	Helical; Potential
	Transmembrane	77 – 97	21	Helical; Potential

Sequences

	Sequence		Length	Mass (Da)
	A4WN93 [UniParc]. Last modified May 29, 2007. Version 1. Checksum: 20D101CC3284631E	FASTA	164	18,195
	10 20 30 40 50 60 MDLFVFFALI WPPYVANGSA VLASRLKWRH PVDFGHNFVD GRRLFGDGKT YEGLAIGVVL 70 80 90 100 110 120 GTVVGYLPNL LHPTLTLLDA LILSVAALLG DLLGAFIKRR LCMPRGHPAF PLDQLDFILM 130 140 150 160 AMLVRSLYAD VPVEYIIAAS VVTPIIHRAT NIAAYILRLK KEPW

References

[1]

"Complete sequence of Pyrobaculum arsenaticum DSM 13514." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. , Cozen A.E., Fitz-Gibbon S.T., House C.H., Saltikov C., Lowe T.M., Richardson P. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 13514 / JCM 11321.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000660 Genomic DNA. Translation: ABP51860.1.
RefSeq	YP_001154512.1. NC_009376.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	340102.Pars_2316.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABP51860; ABP51860; Pars_2316.
GeneID	5054806.
KEGG	pas:Pars_2316.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0575.
HOGENOM	HOG000226016.
OMA	PAYVPNN.
ProtClustDB	PRK04032.
Enzyme and pathway databases
BioCyc	PARS340102:GHGQ-2352-MONOMER.
Family and domain databases
HAMAP	MF_01117. UPF0290.
InterPro	IPR002726. UPF0290. [Graphical view]
Pfam	PF01864. DUF46. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y2316_PYRAR

Accession

Primary (citable) accession number: A4WN93

Entry history

Integrated into UniProtKB/Swiss-Prot:	August 21, 2007
Last sequence update:	May 29, 2007
Last modified:	May 1, 2013
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program