A4WM00 (A4WM00_PYRAR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha-amylase / pullulanase EMBL ABP51417.1
EC=3.2.1.1 EMBL ABP51417.1
EC=3.2.1.41 EMBL ABP51417.1

Gene names

Ordered Locus Names:

Pars_1866

Organism

Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) [Complete proteome] [HAMAP]

Taxonomic identifier

340102 [NCBI]

Taxonomic lineage

Archaea › Crenarchaeota › Thermoprotei › Thermoproteales › Thermoproteaceae › Pyrobaculum

Protein attributes

Sequence length	1000 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABP51417.1
Molecular function	Glycosidase EMBL ABP51417.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-amylase activity Inferred from electronic annotation. Source: EC carbohydrate binding Inferred from electronic annotation. Source: InterPro hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds Inferred from electronic annotation. Source: InterPro pullulanase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 22	22	Potential EMBL ABP51417.1
	Chain	23 – 1000	978	Potential EMBL ABP51417.1		PRO_5000238480

Sequences

	Sequence		Length	Mass (Da)
	A4WM00 [UniParc]. Last modified May 29, 2007. Version 1. Checksum: A07B3FC4D9438708	FASTA	1,000	110,933
	10 20 30 40 50 60 MRAVLALLLA AVAILAGPVN VVFILHNHQP WYVDFEKNEL ILPWVRMHAV GNYLKVPLLI 70 80 90 100 110 120 NESGVPVAFT LSGSLIEQLN WYANGTYIDV RYRISEKIAR GEPLTAEEKY AMLAIPGGFF 130 140 150 160 170 180 DINWQNILYK HPRYAVLLGL RNDAFSKCPP GNVTCVISRF SDQDFVDLAT LFNLLWIDPY 190 200 210 220 230 240 IAKKYSDIWT LVNKTSYTRD DLKKVLDLHR ELVGKVLSLY NELARQGKIE LVPVPYSHPL 250 260 270 280 290 300 MPLLADMGAL EDLRLHISLS EGLFKRYLGT TPTGVWPPEQ AVNDEVLRLF AEAGYLWTVT 310 320 330 340 350 360 DEDVLKTTAP GFSHYSLYYA DYGGRRLYVF FRDKTLSDAL GFRYSSMSPQ VALADFVNYL 370 380 390 400 410 420 KKVPQGECNV VVVALDGENP WENYPNFGDD FLKTFFQGLA ELEKNGTVKI WKPTDFVNHC 430 440 450 460 470 480 KDKATPLPQR QFRYFDLKVD ISIYKSIRDL PTRPVAGKIA EGSWSGGGSL AVWIGDPDEN 490 500 510 520 530 540 VWWMWLKKAR EDVGINRTWD VLFPLLVAEA SDWPFWYGND MGSPQTFDPV AKSALRSYYT 550 560 570 580 590 600 RAGLQPPQYL QTSAYPAGTP REDKIVGRGE GKIAMYGGAV IYANTTHIWI EGGPCGVVYI 610 620 630 640 650 660 SNPDVARSPY MFRGAAKGLG GEALDVYADM AIDTCKGLVY LSDSGRFYPV GNTAALGFIG 670 680 690 700 710 720 ARPGGLLYVE FRGLVYALRV PESYAAQNLL LRAVDPLGDD FGPGKYQYPK NPAFKPGVFD 730 740 750 760 770 780 LTLFELYDLG DKFRFQFRVK ELGGNPWGGP AGFSLQFFHV YINRGGGVRN DTLGLRVSLC 790 800 810 820 830 840 KEASWDVALL IGPGWTGGNR IVYADGVYVD DAMSIKLGTN NTIIADVPKK YLGNYDNKWK 850 860 870 880 890 900 ITVFLTSWDG YGPDNIRNFG VMADEWTVGG ADPVAVLAGV APRVFDVLAE TAEMQVKALT 910 920 930 940 950 960 SYKVVRLPNG TYIGAPAVVC AYLTGSAEMC TATVTQFVTI TATATVTRTF TETYTTVSTQ 970 980 990 1000 VATTVTSTER VKEIDWPTTA ALTVAALVAG LLAGILTRRK

References

[1]

"Complete sequence of Pyrobaculum arsenaticum DSM 13514." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. , Cozen A.E., Fitz-Gibbon S.T., House C.H., Saltikov C., Lowe T.M., Richardson P. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 13514 / JCM 11321.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000660 Genomic DNA. Translation: ABP51417.1.
RefSeq	YP_001154069.1. NC_009376.1.
3D structure databases
ProteinModelPortal	A4WM00.
ModBase	Search...
Protein-protein interaction databases
STRING	A4WM00.
Protein family/group databases
CAZy	GH57. Glycoside Hydrolase Family 57.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5055880.
GenomeReviews	Gene locus Pars_1866 in contig CP000660_GR.
KEGG	pas:Pars_1866.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	arNOG04719.
HOGENOM	HBG726833.
OMA	QDGYGPD.
ProtClustDB	CLSK632443.
Enzyme and pathway databases
BioCyc	PARS340102:PARS_1866-MONOMER.
Family and domain databases
InterPro	IPR008960. Carb-bd_dom_fam9-like. IPR015922. Carb-bd_dom_fam9-like_subgr. IPR019248. DUF2223. IPR011330. Glyco_hydro/deAcase_b/a-brl. IPR004300. Glyco_hydro_57_N. IPR002509. Polysac_deacetylase. [Graphical view]
Gene3D	G3DSA:2.60.40.1190. CBD9. 1 hit. G3DSA:3.20.20.370. Polysac_deacetylase. 2 hits.
Pfam	PF09985. DUF2223. 1 hit. PF03065. Glyco_hydro_57. 1 hit. [Graphical view]
SUPFAM	SSF49344. CBD9-like. 1 hit. SSF88713. Glyco_hydro/deAcase_b/a-brl. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A4WM00_PYRAR

Accession

Primary (citable) accession number: A4WM00

Entry history

Integrated into UniProtKB/TrEMBL:	May 29, 2007
Last sequence update:	May 29, 2007
Last modified:	October 19, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)