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A4WL63

- A4WL63_PYRAR

UniProt

A4WL63 - A4WL63_PYRAR

Protein

50S ribosomal protein L6

Gene

rpl6

Organism
Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 45 (01 Oct 2014)
      Sequence version 1 (29 May 2007)
      Previous versions | rss
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    Functioni

    This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

    Keywords - Ligandi

    RNA-binding, rRNA-bindingUniRule annotation

    Enzyme and pathway databases

    BioCyciPARS340102:GHGQ-1594-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L6UniRule annotation
    Gene namesi
    Name:rpl6UniRule annotation
    Ordered Locus Names:Pars_1576Imported
    OrganismiPyrobaculum arsenaticum (strain DSM 13514 / JCM 11321)Imported
    Taxonomic identifieri340102 [NCBI]
    Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiThermoprotealesThermoproteaceaePyrobaculum
    ProteomesiUP000001567: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    Interactioni

    Subunit structurei

    Part of the 50S ribosomal subunit.UniRule annotation

    Protein-protein interaction databases

    STRINGi340102.Pars_1576.

    Structurei

    3D structure databases

    ProteinModelPortaliA4WL63.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L6P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0097.
    HOGENOMiHOG000039905.
    KOiK02933.
    OMAiISIEIHH.

    Family and domain databases

    Gene3Di3.90.930.12. 2 hits.
    HAMAPiMF_01365_A. Ribosomal_L6_A.
    InterProiIPR000702. Ribosomal_L6.
    IPR020040. Ribosomal_L6_a/b-dom.
    IPR019907. Ribosomal_L6P_arc.
    [Graphical view]
    PANTHERiPTHR11655. PTHR11655. 1 hit.
    PfamiPF00347. Ribosomal_L6. 2 hits.
    [Graphical view]
    PIRSFiPIRSF002162. Ribosomal_L6. 1 hit.
    SUPFAMiSSF56053. SSF56053. 2 hits.
    TIGRFAMsiTIGR03653. arch_L6P. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    A4WL63-1 [UniParc]FASTAAdd to Basket

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    MRVVYSVEEV EIPKGVNVSI EKTGPFDYVV KVKGPLGELV KEFRNTPVVM    50
    NVQDGKILLE VFNVRKKEYA ILGTYKGILK NMFLGVTKGW RYKLKIIYTH 100
    FPVLAKVQGS QLVIENFLGR KSKITLDIPK GVKVEVKGKE DIVVEGIDRE 150
    LVGTFASSIQ AATELHGDER PSPHGREGTL GVVDGIYVVG VEHIKA 196
    Length:196
    Mass (Da):21,747
    Last modified:May 29, 2007 - v1
    Checksum:i4ADA843B37AD3524
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000660 Genomic DNA. Translation: ABP51130.1.
    RefSeqiYP_001153782.1. NC_009376.1.

    Genome annotation databases

    EnsemblBacteriaiABP51130; ABP51130; Pars_1576.
    GeneIDi5054194.
    KEGGipas:Pars_1576.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000660 Genomic DNA. Translation: ABP51130.1 .
    RefSeqi YP_001153782.1. NC_009376.1.

    3D structure databases

    ProteinModelPortali A4WL63.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 340102.Pars_1576.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABP51130 ; ABP51130 ; Pars_1576 .
    GeneIDi 5054194.
    KEGGi pas:Pars_1576.

    Phylogenomic databases

    eggNOGi COG0097.
    HOGENOMi HOG000039905.
    KOi K02933.
    OMAi ISIEIHH.

    Enzyme and pathway databases

    BioCyci PARS340102:GHGQ-1594-MONOMER.

    Family and domain databases

    Gene3Di 3.90.930.12. 2 hits.
    HAMAPi MF_01365_A. Ribosomal_L6_A.
    InterProi IPR000702. Ribosomal_L6.
    IPR020040. Ribosomal_L6_a/b-dom.
    IPR019907. Ribosomal_L6P_arc.
    [Graphical view ]
    PANTHERi PTHR11655. PTHR11655. 1 hit.
    Pfami PF00347. Ribosomal_L6. 2 hits.
    [Graphical view ]
    PIRSFi PIRSF002162. Ribosomal_L6. 1 hit.
    SUPFAMi SSF56053. SSF56053. 2 hits.
    TIGRFAMsi TIGR03653. arch_L6P. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 13514 / JCM 11321Imported.

    Entry informationi

    Entry nameiA4WL63_PYRAR
    AccessioniPrimary (citable) accession number: A4WL63
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 29, 2007
    Last sequence update: May 29, 2007
    Last modified: October 1, 2014
    This is version 45 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3