Skip Header

Contribute Send feedback
Read comments (?) or add your own

A4W6G7 (ARAB_ENT38) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Ribulokinase
EC=2.7.1.16
Gene names
Name:araB
Ordered Locus Names:Ent638_0610
OrganismEnterobacter sp. (strain 638) [Complete proteome] [HAMAP]
Taxonomic identifier399742 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Enterobacter

Protein attributes

Sequence length569 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L(or D)-ribulose = ADP + L(or D)-ribulose 5-phosphate. HAMAP MF_00520

Pathway

Carbohydrate degradation; L-arabinose degradation via L-ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route): step 2/3. HAMAP MF_00520

Sequence similarities

Belongs to the ribulokinase family.

Ontologies

Keywords
   Biological processArabinose catabolism
Carbohydrate metabolism
   LigandATP-binding
Nucleotide-binding
   Molecular functionKinase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processL-arabinose catabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

ribulokinase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 569569Ribulokinase HAMAP MF_00520
PRO_1000060919

Sequences

Sequence LengthMass (Da)Tools
A4W6G7 [UniParc].

Last modified May 29, 2007. Version 1.
Checksum: C21371FEBFE21CA0

FASTA56961,774
        10         20         30         40         50         60 
MAIAIGLDFG SDSVRALAVE CRTGQEIATS VEWYPRWQEG RYCDAPNNQF RHHPRDYIES 

        70         80         90        100        110        120 
MEAAIKTVLA ELSEEQRAQI VGIGVDSTGS TPAPVDAEGR VLALRPEFAD NPNAMFVLWK 

       130        140        150        160        170        180 
DHTAVEEAEA ITRLCHQPGK ADYSRYIGGI YSSEWFWAKI LHVTRADPAV AQAAVSWIEL 

       190        200        210        220        230        240 
CDWVPALLSG TTRPQDIRRG RCSAGHKSLW HESWGGLPPA AFFDELDPII NQSLKYPLFT 

       250        260        270        280        290        300 
DTFTADIPVG TLNEEWARRL GLPQNVAISG GAFDCHMGAV GAGAQPNTLV KVIGTSTCDI 

       310        320        330        340        350        360 
LTADKATVGD RAVKGICGQV DGSVVPDFIG LEAGQSAFGD IYAWFGRVLG WPLDQLAATH 

       370        380        390        400        410        420 
PELKPQIDAS KKQLLPQLTE AWAKNPSLDH LPVVLDWFNG RRTPFANQRL KGVITDLNLA 

       430        440        450        460        470        480 
TDAPALFGGL IAATAFGARA IMECFTEQGI AVNEVMALGG IARKNQVIMQ ACCDVLNRPL 

       490        500        510        520        530        540 
QIVASDQCCA LGAAIFAAVA AGVHADIPTA QQHMASAVEN TLQPRAQQAQ RFEQLYQRYL 

       550        560 
QWSKSAEQHY LPVATPAKTS AEKPATLTH

« Hide

References

[1]"Complete sequence of chromosome of Enterobacter sp. 638."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Kim E., Taghavi S., Newman L., Vangronsveld J., van der Lelie D., Richardson P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 638.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000653 Genomic DNA. Translation: ABP59297.1.
RefSeqYP_001175348.1. NC_009436.1.

3D structure databases

ProteinModelPortalA4W6G7.
ModBaseSearch...

Protein-protein interaction databases

STRINGA4W6G7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5112595.
GenomeReviewsGene locus Ent638_0610 in contig CP000653_GR.
KEGGent:Ent638_0610.
NMPDRfig|399742.4.peg.665.
PATRIC20410764. VBIEntSp101211_0739.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1069.
HOGENOMHBG312681.
OMANGRRTPD.
PhylomeDBA4W6G7.
ProtClustDBPRK04123.

Enzyme and pathway databases

BioCycESP42895:ENT638_0610-MONOMER.

Family and domain databases

HAMAPMF_00520. Ribulokinase.
[Tree]
InterProIPR000577. Carb_kinase_FGGY.
IPR018485. Carb_kinase_FGGY_C.
IPR018484. Carb_kinase_FGGY_N.
IPR005929. L_ribulokin.
[Graphical view]
KOK00853.
PANTHERPTHR10196. FGGY_kin. 1 hit.
PfamPF02782. FGGY_C. 1 hit.
PF00370. FGGY_N. 1 hit.
[Graphical view]
TIGRFAMsTIGR01234. L-ribulokinase. 1 hit.
ProtoNetSearch...

Entry information

Entry nameARAB_ENT38
AccessionPrimary (citable) accession number: A4W6G7
Entry history
Integrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: May 29, 2007
Last modified: January 25, 2012
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents