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Protein
Submitted name:

Alpha amylase, catalytic region

Gene

Ent638_0150

Organism
Enterobacter sp. (strain 638)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciESP399742:GJ0E-151-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase, catalytic regionImported
Gene namesi
Ordered Locus Names:Ent638_0150Imported
OrganismiEnterobacter sp. (strain 638)Imported
Taxonomic identifieri399742 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEnterobacter
ProteomesiUP000000230 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1818 PotentialImportedAdd
BLAST
Chaini19 – 676658 PotentialImportedPRO_5000237543Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi399742.Ent638_0150.

Structurei

3D structure databases

ProteinModelPortaliA4W560.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000273912.
KOiK01176.
OMAiFNWHNAT.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A4W560-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRSALALLL LPAMANAGWS SPGFSAFNAE GTGLFTGHAT LAKGTRPLTL
60 70 80 90 100
SFDNACWQPT EAIKLNEMLS LKPCEGTPPQ WRLFREGEYQ MRIDTRSGTP
110 120 130 140 150
TLMITVQSVT DKPVTNVTQQ CPKWDGKPLT LDVTNTFPEG SVVRDFYSKQ
160 170 180 190 200
TAMVQQGKIT LQPAANSNGL LLLERAETEK TAPFSWQNAT VYFVLTDRYV
210 220 230 240 250
NGDPSNDNSY GRQKDDMQEI GTFHGGDLKG LTSKLDYLQN LGVNALWISS
260 270 280 290 300
PLEQIHGWVG GGTKGDFPHY AYHGYYTQDW TRLDANMGQE DDLRHLVDEA
310 320 330 340 350
HKRGIRILFD VVMNHTGYAT LADMQEYQFG ALYVQGDELK KTLGERWTDW
360 370 380 390 400
KPAAGQSWHS FNDYINFSDK AGWENWWGKK WIRTDIGDYD NPGFDDLTMS
410 420 430 440 450
LAFLPDLKTE STAPSGLPNF YRHKPDTHAK AIAGYTPRDY LTHWLSQWVR
460 470 480 490 500
DYGIDGFRVD TAKHVEMAGW QQLKEQASAA LKAWKTAHPD QKLDDAPFWM
510 520 530 540 550
TGESWGHGVM QSDYYRHGFD AMINFDYQEQ AAKAVDCLAD MDLTWQQMAE
560 570 580 590 600
KLQGYNVLSY LSSHDTRLFR EGGQRAAELL LLAPGAVQIY YGDESERPFG
610 620 630 640 650
PTGSDPLQGT RSDMNWQEVS GSQAQTVAHW QILGQFRARH PSIGEGTQTT
660 670
LSLKQGYGFT RQHQTDKVMV VWAGNQ
Length:676
Mass (Da):76,182
Last modified:May 29, 2007 - v1
Checksum:i64A00E10AD9AE2F4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000653 Genomic DNA. Translation: ABP58840.1.
RefSeqiWP_011915416.1. NC_009436.1.
YP_001174891.1. NC_009436.1.

Genome annotation databases

EnsemblBacteriaiABP58840; ABP58840; Ent638_0150.
KEGGient:Ent638_0150.
PATRICi20409802. VBIEntSp101211_0275.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000653 Genomic DNA. Translation: ABP58840.1.
RefSeqiWP_011915416.1. NC_009436.1.
YP_001174891.1. NC_009436.1.

3D structure databases

ProteinModelPortaliA4W560.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi399742.Ent638_0150.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABP58840; ABP58840; Ent638_0150.
KEGGient:Ent638_0150.
PATRICi20409802. VBIEntSp101211_0275.

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000273912.
KOiK01176.
OMAiFNWHNAT.
OrthoDBiEOG65QWH3.

Enzyme and pathway databases

BioCyciESP399742:GJ0E-151-MONOMER.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the plant growth promoting endophytic bacterium Enterobacter sp. 638."
    Taghavi S., van der Lelie D., Hoffman A., Zhang Y.B., Walla M.D., Vangronsveld J., Newman L., Monchy S.
    PLoS Genet. 6:E1000943-E1000943(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 638Imported.

Entry informationi

Entry nameiA4W560_ENT38
AccessioniPrimary (citable) accession number: A4W560
Entry historyi
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: May 27, 2015
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.