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A4VY41 (A4VY41_STRSY) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:SSU05_2064
OrganismStreptococcus suis (strain 05ZYH33) [Complete proteome] [HAMAP]
Taxonomic identifier391295 [NCBI]
Taxonomic lineageBacteriaFirmicutesLactobacillalesStreptococcaceaeStreptococcus

Protein attributes

Sequence length1230 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A4VY41 [UniParc].

Last modified May 29, 2007. Version 1.
Checksum: 8082A6B3BC847B7A

FASTA1,230136,383
        10         20         30         40         50         60 
MSQMPIQENL IKLSRKTVNG LFKSNCQQSV KVAPCSFRQK QVTSSMQVCQ GATEEPIEAG 

        70         80         90        100        110        120 
YFRVHFKTLP SDNLSSLGLW TWDDVEKPSS DLGAWPTGAT NFSTAKQDDY GYYLDIKMKD 

       130        140        150        160        170        180 
ETASKISLLI NNTSGDNITG DKTIERISTK MNEAWFDENY QLSLYQPLKE GYIRINYFRT 

       190        200        210        220        230        240 
DGNYDQKGLW IWGDVTDLTL GDWPNGIDFE NQGKYGAYID VKLTDLPSSI GFLLLDESKS 

       250        260        270        280        290        300 
GDDVKIQQKD YSFKDLKNQT QIFLKDDDAT IYTNPYFVNN VRATGVSHVS LTALEAAFTT 

       310        320        330        340        350        360 
LEGADKDSIL EKLSVTDKNG QTVAVTDLVL DLTSNKVRVL GDFNQENAGY TLKYGNDSFT 

       370        380        390        400        410        420 
TTMSWQLKDE LYAYDGELGA RVRQAGSVVD MTLWSPSADS VAVVLYDKDD QSKVVGKLAM 

       430        440        450        460        470        480 
TKGDKGQWDL ELNSQSGLGI ADYRGYYYHY EITRGDQSVL VLDPYAKSLA EWNSDLADTD 

       490        500        510        520        530        540 
PSYRIAKAAI VDPAEVGPSD LNYATIPNFN QREDAIIYEA HVRDFTADPA ISDELTAQFG 

       550        560        570        580        590        600 
TFAAFAERLS YLKELGVTHI QLLPVMSYYF VNELKNAERM SEYASSNSNY NWGYDPQSYF 

       610        620        630        640        650        660 
AFTGMYSTDP TDPMKRIEEF KNLVNEIHKQ GMGVILDVVY NHTSKTFLFE DLEPNYYHFM 

       670        680        690        700        710        720 
EADGTAKSSF GGGRLGTTHY MSRRVLVDSI KYLVDEFKVD GFRFDMMGDH DAEAIELAFT 

       730        740        750        760        770        780 
EAQKLNPNII MLGEGWRTFT GDANQPVQPA DQDWMSSTDT VAVFSDEIRN TLKSGYPNEG 

       790        800        810        820        830        840 
QPAFITGGAK SVESVFNNIK AQPGNFLADD PGDVIQYIAA HDNLTLFDII AQSIKKDPSV 

       850        860        870        880        890        900 
TENYTEIHQR QRLGNLLVLT AQGTPFIHSG QEYGRTKQFR HPDYKEPVTE DKVPNKAHLL 

       910        920        930        940        950        960 
TNADGTPFDY PYYIHDSYDS SDAVNKFDWT KATDEALYPE NTRTQAFTKG LIALRKSTDA 

       970        980        990       1000       1010       1020 
FRLGTKEEVE QKVSLISIPG QNGIAKNDVV IAYQTIASNG DRYAVFVNAD SKERSFVLSD 

      1030       1040       1050       1060       1070       1080 
IYKELLKGQV LVDGERAGVE ALSDLVGVEL TDSSVVLAPL TATVIRLPYI TTALPDTAPT 

      1090       1100       1110       1120       1130       1140 
AEEKPSLDFT TKERTEETVL PIAEEVRYDA TLAKGQSYVL QEGKAGKRVL VYQDVLVDGK 

      1150       1160       1170       1180       1190       1200 
VVATNLLSET VVDGEARIVV KGSMEAKDVV EKPSLSTPTA QASGQATSGA SKASLPITGD 

      1210       1220       1230 
RQSDLALLGL GLAGLGLTVA AQGRTKKSEE 

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References

[1]"A glimpse of streptococcal toxic shock syndrome from comparative genomics of S. suis 2 Chinese isolates."
BGI
Chen C., Tang J., Dong W., Wang C., Feng Y., Wang J., Zheng F., Pan X., Liu D., Li M., Song Y., Zhu X., Sun H., Feng T., Guo Z., Ju A., Ge J., Dong Y. expand/collapse author list , Sun W., Jiang Y., Wang J., Yan J., Yang H., Wang X., Gao G.F., Yang R., Wang J., Yu J.
PLoS ONE 2:E315-E315(2007) [PubMed: 17375201] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 05ZYH33.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000407 Genomic DNA. Translation: ABP91030.1.
RefSeqYP_001199430.1. NC_009442.1.

3D structure databases

ProteinModelPortalA4VY41.
ModBaseSearch...

Protein-protein interaction databases

STRINGA4VY41.

Protein family/group databases

CAZyCBM41. Carbohydrate-Binding Module Family 41.
CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBSTRT00000053206; EBSTRP00000049393; EBSTRG00000053196.
GeneID5100285.
GenomeReviewsGene locus SSU05_2064 in contig CP000407_GR.
KEGGssu:SSU05_2064.
PATRIC19775882. VBIStrSui128929_2033.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1523.
GeneTreeEBGT00050000026660.
HOGENOMHBG575037.
OMAKSGFPNE.
PhylomeDBA4VY41.

Enzyme and pathway databases

BioCycSSUI391295:SSU05_2064-MONOMER.

Family and domain databases

InterProIPR015902. Alpha_amylase.
IPR011098. G5.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR005323. PUD.
IPR011838. Pullulan_Gpos.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 2 hits.
G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
PANTHERPTHR10357. Alpha_amylase. 1 hit.
PfamPF00128. Alpha-amylase. 2 hits.
PF02922. CBM_48. 1 hit.
PF07501. G5. 1 hit.
PF03714. PUD. 2 hits.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
TIGRFAMsTIGR02102. Pullulan_Gpos. 1 hit.
PROSITEPS51109. G5. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA4VY41_STRSY
AccessionPrimary (citable) accession number: A4VY41
Entry history
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: December 14, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)