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Protein

tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG

Gene

mnmG

Organism
Pseudomonas stutzeri (strain A1501)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm5s2U34.UniRule annotation

Cofactori

FADUniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi13 – 186FADUniRule annotation
Nucleotide bindingi273 – 28715NADUniRule annotationAdd
BLAST

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

tRNA processing

Keywords - Ligandi

FAD, Flavoprotein, NAD

Enzyme and pathway databases

BioCyciPSTU379731:GJER-4197-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmGUniRule annotation
Alternative name(s):
Glucose-inhibited division protein AUniRule annotation
Gene namesi
Name:mnmGUniRule annotation
Synonyms:gidAUniRule annotation
Ordered Locus Names:PST_4202
OrganismiPseudomonas stutzeri (strain A1501)
Taxonomic identifieri379731 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000000233 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 630630tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmGPRO_1000016650Add
BLAST

Interactioni

Subunit structurei

Homodimer. Heterotetramer of two MnmE and two MnmG subunits.UniRule annotation

Protein-protein interaction databases

STRINGi379731.PST_4202.

Structurei

3D structure databases

ProteinModelPortaliA4VS73.
SMRiA4VS73. Positions 1-550.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the MnmG family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4107RE5. Bacteria.
COG0445. LUCA.
HOGENOMiHOG000201060.
KOiK03495.
OMAiFRPGYAI.
OrthoDBiEOG6W9X6J.

Family and domain databases

Gene3Di3.50.50.60. 1 hit.
HAMAPiMF_00129. MnmG_GidA.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR026904. GidA-assoc_3.
IPR004416. MnmG.
IPR002218. MnmG-rel.
IPR020595. MnmG-rel_CS.
[Graphical view]
PfamiPF01134. GIDA. 1 hit.
PF13932. GIDA_assoc. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.
TIGRFAMsiTIGR00136. gidA. 1 hit.
PROSITEiPS01280. GIDA_1. 1 hit.
PS01281. GIDA_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A4VS73-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDFPSRFDVI VIGGGHAGTE AALAAARMGV KTLLLTHNVE TLGQMSCNPA
60 70 80 90 100
IGGIGKSHLV KEIDALGGAM AVATDKGGIQ FRVLNSRKGP AVRATRAQAD
110 120 130 140 150
RVLYKAAIRE LLENQPNLWI FQQAADDLIV EQNEVRGVVT QMGLRFLATS
160 170 180 190 200
VVLTTGTFLG GLIHIGLQNY SGGRAGDPPS IALAKRLREL PLRVGRLKTG
210 220 230 240 250
TPPRIDGRSV DFSQMTEQPG DTPLPVMSFL GSREQHPPQV SCWITHTNAR
260 270 280 290 300
THEIIAANLD RSPMYSGVIE GVGPRYCPSI EDKIHRFADK DSHQVFLEPE
310 320 330 340 350
GLTTHELYPN GISTSLPFDV QLQIVQSIRG MENAHIVRPG YAIEYDYFDP
360 370 380 390 400
RDLKYSLETK VIGGLFFAGQ INGTTGYEEA GAQGLLAGAN AALRAQGKDS
410 420 430 440 450
WCPRRDEAYL GVLVDDLITL GTQEPYRMFT SRAEYRLILR EDNADLRLTE
460 470 480 490 500
KGRELGLVDD ARWAAFCAKR EGIEREEQRL KNSWVRPGTP QGDAIAERFG
510 520 530 540 550
SPLAREYNLL NLLARPEIDY QSLIELTGPG EPDPQVAEQV EIKTKYAGYI
560 570 580 590 600
ERQQDEIEKL RASENVALPA DLDYATISGL SKEIQHKLGQ ARPQTLGQAS
610 620 630
RIPGVTPAAV SLLMIHLKKR SAGQQLEQSA
Length:630
Mass (Da):69,099
Last modified:May 29, 2007 - v1
Checksum:iC82F9F8B4F5D6A8D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000304 Genomic DNA. Translation: ABP81824.1.
RefSeqiWP_011915201.1. NC_009434.1.

Genome annotation databases

EnsemblBacteriaiABP81824; ABP81824; PST_4202.
GeneIDi25040583.
KEGGipsa:PST_4202.
PATRICi19968926. VBIPseStu31643_4191.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000304 Genomic DNA. Translation: ABP81824.1.
RefSeqiWP_011915201.1. NC_009434.1.

3D structure databases

ProteinModelPortaliA4VS73.
SMRiA4VS73. Positions 1-550.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi379731.PST_4202.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABP81824; ABP81824; PST_4202.
GeneIDi25040583.
KEGGipsa:PST_4202.
PATRICi19968926. VBIPseStu31643_4191.

Phylogenomic databases

eggNOGiENOG4107RE5. Bacteria.
COG0445. LUCA.
HOGENOMiHOG000201060.
KOiK03495.
OMAiFRPGYAI.
OrthoDBiEOG6W9X6J.

Enzyme and pathway databases

BioCyciPSTU379731:GJER-4197-MONOMER.

Family and domain databases

Gene3Di3.50.50.60. 1 hit.
HAMAPiMF_00129. MnmG_GidA.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR026904. GidA-assoc_3.
IPR004416. MnmG.
IPR002218. MnmG-rel.
IPR020595. MnmG-rel_CS.
[Graphical view]
PfamiPF01134. GIDA. 1 hit.
PF13932. GIDA_assoc. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.
TIGRFAMsiTIGR00136. gidA. 1 hit.
PROSITEiPS01280. GIDA_1. 1 hit.
PS01281. GIDA_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of the metabolically versatile and root-associated nitrogen-fixing bacterium Pseudomonas stutzeri A1501."
    Yan Y., Yang J., Dou Y., Ping S., Chen M., Yao Z., Li H., Lu W., Zhang W., Peng J., Liu W., He S., Geng L., Zhang X., Yang F., Li D., Lin Z., Wang Y.
    , Elmerich C., Lin M., Jin Q.
    Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: A1501.

Entry informationi

Entry nameiMNMG_PSEU5
AccessioniPrimary (citable) accession number: A4VS73
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: May 29, 2007
Last modified: January 20, 2016
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.