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A4VQ66 (A4VQ66_PSEU5) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:PST_3489 EMBL ABP81117.1
OrganismPseudomonas stutzeri (strain A1501) [Complete proteome] [HAMAP] EMBL ABP81117.1
Taxonomic identifier379731 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length613 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Molecular functionHydrolase EMBL ABP81117.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncation binding

Inferred from electronic annotation. Source: InterPro

hydrolase activity

Inferred from electronic annotation. Source: UniProtKB-KW

starch binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A4VQ66 [UniParc].

Last modified May 29, 2007. Version 1.
Checksum: 0D9112FC36AFB81D

FASTA61366,463
        10         20         30         40         50         60 
MIARGLRPGH YAACNWAGEV GGRGVQGQPA GAGRRPGRRS SSSGGLAVGY PNKHKNRSIA 

        70         80         90        100        110        120 
MSHILRAAVL AAVLLPFPAL ADQAGKSPAG VRYHGGDEII LQGFHWNVVR EAPNDWYNIL 

       130        140        150        160        170        180 
RQQASTIAAD GFSAIWMPVP WRDFSSWSEG GKSGGGEGYF WHDFNKNGRY GSDAQLRQAA 

       190        200        210        220        230        240 
GALGGAGVKV LYDVVPNHMN RGYPNKEINL PAGQGFWRND CADPGNYPND CDDGDRFVGG 

       250        260        270        280        290        300 
DADLNTGHPQ VYGMFRDEFA NLRSQYGAGG FRFDFVRGFA PERVNSWMTD SADNSFCVGE 

       310        320        330        340        350        360 
LWKGPSEYPS WDWRNTASWQ QIIKDWSDRA KCPVFDFALK ERMQNGSIAD WKNGLNGNPD 

       370        380        390        400        410        420 
PRWREVAVTF VDNHDTGYSP GQNGGQHHWP LQDGLIRQAY AYILTSPGTP VVYWSHMYDW 

       430        440        450        460        470        480 
GYRDFIRQLI QVRRAAGVRA DSAISFHSGY SGLVATVTGS QQTLVVALNS NLSNPGQVAS 

       490        500        510        520        530        540 
GSFSEAVNTS NGQVRVWRTG AGSGGGDNGG GEPGALVSVN FRCDNGVTQP GDSVYAVGNV 

       550        560        570        580        590        600 
SQLGNWSPAS AVRLTDTSGY PTWKGRISLP AGQNVEWKCL IRNEANATLV RQWQGGANNS 

       610 
VKPTEGATTA GRF 

« Hide

References

[1]"Complete genome sequence of the metabolically versatile and root-associated nitrogen-fixing bacterium Pseudomonas stutzeri A1501."
Yan Y., Yang J., Dou Y., Ping S., Chen M., Yao Z., Li H., Lu W., Zhang W., Peng J., Liu W., He S., Geng L., Zhang X., Yang F., Li D., Lin Z., Wang Y. expand/collapse author list , Elmerich C., Lin M., Jin Q.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: A1501.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000304 Genomic DNA. Translation: ABP81117.1.
RefSeqYP_001173959.1. NC_009434.1.

3D structure databases

ProteinModelPortalA4VQ66.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING379731.PST_3489.

Protein family/group databases

CAZyCBM20. Carbohydrate-Binding Module Family 20.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABP81117; ABP81117; PST_3489.
GeneID5096450.
KEGGpsa:PST_3489.
PATRIC19967466. VBIPseStu31643_3467.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG275445.
HOGENOMHOG000267374.
KOK01176.
OMAFALKERM.
OrthoDBEOG65QWH3.

Enzyme and pathway databases

BioCycPSTU379731:GJER-3484-MONOMER.

Family and domain databases

Gene3D2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015165. DUF1921.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF00686. CBM_20. 1 hit.
PF09081. DUF1921. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM01065. CBM_2. 1 hit.
[Graphical view]
SUPFAMSSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEPS51166. CBM20. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA4VQ66_PSEU5
AccessionPrimary (citable) accession number: A4VQ66
Entry history
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: May 14, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)