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Protein
Submitted name:

Alpha-amylase

Gene

PST_3487

Organism
Pseudomonas stutzeri (strain A1501)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciPSTU379731:GJER-3482-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
Ordered Locus Names:PST_3487Imported
OrganismiPseudomonas stutzeri (strain A1501)Imported
Taxonomic identifieri379731 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000000233: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi379731.PST_3487.

Structurei

3D structure databases

ProteinModelPortaliA4VQ64.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000273912.
KOiK01176.
OMAiLRSFMNW.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

A4VQ64-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRAHRLPALS LLLGFTLALP VLADPELAAR LDGQPLPLNW NTLASDRYDI
60 70 80 90 100
ELSLAPGQLQ LRMPQASGEA VALAPFRRQP LGTDSIYRYE VPEAGRYRLI
110 120 130 140 150
VETGAAPALR LLPIKAAEPQ AATAVCKPWE GGAVEVTVGE VFRDGETLRD
160 170 180 190 200
ALSGATAVVR DGRVRLQPAA GSDGLLLLER AEAPEQPVAR DWRNAIVYFV
210 220 230 240 250
LTDRFANGDP GNDRSYGRAP DGAEEIGTFH GGDLKGLTER LDHIASLGVD
260 270 280 290 300
ALWISAPYEQ IHGWVGGGDR GDFRHYGYHG YYALDFTQLD ANMGSEDDLR
310 320 330 340 350
ALISAAHARG IRVLFDVVLN HPGYSTLQDM QQLGFGALRD GMAEYLPEQW
360 370 380 390 400
TTWQPEAHEN LHAYHNLVDY EHPSWAAWWG RDWVRAGIAD YDTPPSATVD
410 420 430 440 450
PLKGSLAFLP DFRTESEAVV ALPEFLAHKA QTRAEPREGY RVRDYLIEWL
460 470 480 490 500
TGWVREFGVD GFRADTVKHV EPSTWAELRV AAERARADWA RANPDDPMAD
510 520 530 540 550
EPFWMVGEVF GHGPEASDYL DQGFDALINF DFQKQAVAAS DCLAAAEPSY
560 570 580 590 600
ADYARRLAET PGHNLLSYAS SHDTALFNQL AKGDLARQRG LATALLLAPG
610 620 630 640 650
AVQIYYGDES ARSFGPSGSD PYQGTRSSMN WAEHQRPEIA GLIEHWQRIG
660 670 680 690
QFRTRHPAIG AGEHKLLSSG QPYAFARELG EDKVIVVQAR
Length:690
Mass (Da):76,077
Last modified:May 29, 2007 - v1
Checksum:iC1B66E9A2AF47CBD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000304 Genomic DNA. Translation: ABP81115.1.
RefSeqiYP_001173957.1. NC_009434.1.

Genome annotation databases

EnsemblBacteriaiABP81115; ABP81115; PST_3487.
GeneIDi5096448.
KEGGipsa:PST_3487.
PATRICi19967462. VBIPseStu31643_3465.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000304 Genomic DNA. Translation: ABP81115.1.
RefSeqiYP_001173957.1. NC_009434.1.

3D structure databases

ProteinModelPortaliA4VQ64.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi379731.PST_3487.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABP81115; ABP81115; PST_3487.
GeneIDi5096448.
KEGGipsa:PST_3487.
PATRICi19967462. VBIPseStu31643_3465.

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000273912.
KOiK01176.
OMAiLRSFMNW.
OrthoDBiEOG65QWH3.

Enzyme and pathway databases

BioCyciPSTU379731:GJER-3482-MONOMER.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of the metabolically versatile and root-associated nitrogen-fixing bacterium Pseudomonas stutzeri A1501."
    Yan Y., Yang J., Dou Y., Ping S., Chen M., Yao Z., Li H., Lu W., Zhang W., Peng J., Liu W., He S., Geng L., Zhang X., Yang F., Li D., Lin Z., Wang Y.
    , Elmerich C., Lin M., Jin Q.
    Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: A1501Imported.

Entry informationi

Entry nameiA4VQ64_PSEU5
AccessioniPrimary (citable) accession number: A4VQ64
Entry historyi
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: February 4, 2015
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.