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A4VMW1 (A4VMW1_PSEU5) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:PST_2662 EMBL ABP80312.1
OrganismPseudomonas stutzeri (strain A1501) [Complete proteome] [HAMAP] EMBL ABP80312.1
Taxonomic identifier379731 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length568 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A4VMW1 [UniParc].

Last modified May 29, 2007. Version 1.
Checksum: 222BDDE93F28A196

FASTA56863,680
        10         20         30         40         50         60 
MKAFATLYSR LDATTSSNAK LAAMRDYFRE ADPSDAAWAV YFLAGGRPRQ LVPTRALRET 

        70         80         90        100        110        120 
AMQAAGLPEW LFEESYQAVG DMAETISLLM SEAEHSSEDG LAVWMQDRLL PLRGLPPEEL 

       130        140        150        160        170        180 
AERLPALWAQ LDRLSLMVCI KLITGAFRVG VSKLLVTRAL ASLADLDPKR VAQRLVGYTD 

       190        200        210        220        230        240 
LSHRPSAEGY RALIAEESEH EHAQRGGQPY PFFLAHALQA PVDTFDTLLG APDNWFIEWK 

       250        260        270        280        290        300 
WDGIRAQLVK RDGQIWVWSR GEELVSERFP ELCELARCLP DGTVIDGEIL VWKHDPETPA 

       310        320        330        340        350        360 
GELFDAASTG EPSADGFGVQ PFALLQQRIG RKNLTAKVLQ DAPVAVLAYD LLEWQGDDWR 

       370        380        390        400        410        420 
QREHRERRQQ LEAVVGQCPS PQLMLSPLVS GADWQDLARQ REASRALGVE GMMIKARAAQ 

       430        440        450        460        470        480 
YGVGRTKDVG VWWKWKIDPY SVDAVLIYAQ RGHGRRASLY TDYTFAVWDG EPGDHERKLV 

       490        500        510        520        530        540 
PFAKAYSGLT DEEMRKVDAI VRKTTVEKFG PVRSVTPTLV FELGFEGIAA SSRHKSGIAV 

       550        560 
RFPRMLRWRL DKPVEEADTL ATLRELLG 

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References

[1]"Complete genome sequence of the metabolically versatile and root-associated nitrogen-fixing bacterium Pseudomonas stutzeri A1501."
Yan Y., Yang J., Dou Y., Ping S., Chen M., Yao Z., Li H., Lu W., Zhang W., Peng J., Liu W., He S., Geng L., Zhang X., Yang F., Li D., Lin Z., Wang Y. expand/collapse author list , Elmerich C., Lin M., Jin Q.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: A1501.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000304 Genomic DNA. Translation: ABP80312.1.
RefSeqYP_001173154.1. NC_009434.1.

3D structure databases

ProteinModelPortalA4VMW1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING379731.PST_2662.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABP80312; ABP80312; PST_2662.
GeneID5095624.
KEGGpsa:PST_2662.
PATRIC19965822. VBIPseStu31643_2665.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036007.
KOK01971.
OMAGEFYPFQ.
OrthoDBEOG6Q8HXT.

Enzyme and pathway databases

BioCycPSTU379731:GJER-2657-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA4VMW1_PSEU5
AccessionPrimary (citable) accession number: A4VMW1
Entry history
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: May 14, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)