A4VM01 (A4VM01_PSEU5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Error-prone DNA polymerase HAMAP MF_01902
EC=2.7.7.7 HAMAP MF_01902

Gene names

Name:	dnaE2 HAMAP MF_01902
Ordered Locus Names:	PST_2347

Organism

Pseudomonas stutzeri (strain A1501) [Complete proteome] [HAMAP]

Taxonomic identifier

379731 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas

Protein attributes

Sequence length	1065 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase By similarity. HAMAP MF_01902
Catalytic activity	Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). HAMAP MF_01902 SAAS SAAS004013
Subcellular location	Cytoplasm By similarity HAMAP MF_01902 SAAS SAAS004013.
Sequence similarities	Belongs to the DNA polymerase type-C family. DnaE2 subfamily. HAMAP MF_01902

Ontologies

Keywords
Biological process	DNA damage DNA repair HAMAP MF_01902 SAAS SAAS004013 DNA replication HAMAP MF_01902 SAAS SAAS004013
Cellular component	Cytoplasm HAMAP MF_01902 SAAS SAAS004013
Molecular function	DNA-directed DNA polymerase HAMAP MF_01902 SAAS SAAS004013 Nucleotidyltransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA repair Inferred from electronic annotation. Source: HAMAP DNA replication Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	3'-5' exonuclease activity Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA-directed DNA polymerase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A4VM01 [UniParc]. Last modified May 29, 2007. Version 1. Checksum: 72D8C49D6C51478B	FASTA	1,065	120,292
	10 20 30 40 50 60 MGWCRRAARL LSGANHYRPT GLGVSRPYRR AAAAARLVRM NAEYAELHCL SNFSFQRGAS 70 80 90 100 110 120 SARELFERAK RQGYDALAIT DECSLAGIVR AWQASKDTGL PLIIGSEVQI EGGPKLVLLV 130 140 150 160 170 180 ENLTGYQALC QLITRARRRA EKGRYQALRE DLSEGSLEGL LAIWLPGHAG ADTDGRWLLE 190 200 210 220 230 240 RFRERLWLGI ELHRGPDDAL QLRQSLTQAS RLGIPAVACG DVHMHARGRR ALQDCMTAIR 250 260 270 280 290 300 HHLPVAEAGC HLFPNGERHL RSREELAQLY PAALLSETLR ISQRCHFQLD QLKYHYPHEL 310 320 330 340 350 360 VPPGHDTTSW LRKLVEDGAR WRWPDGIPEK ARAQIEHELE LIADLHYESY FLTVHDIVRF 370 380 390 400 410 420 ARERGILCQG RGSAANSSVC FVLGITELDP VRSKLLFERF LSRERNEPPD IDVDFEHDRR 430 440 450 460 470 480 EEVIQYVFQR YGRNRAALTA VASSYRATGA LRDVAKALGL PPDQINALAG CCGRWSEHIP 490 500 510 520 530 540 DDSRLREAGF DPDNPILRRV LVLTDALIGF PRHLSQHPGG FVISEQPLDT LVPIENASMA 550 560 570 580 590 600 DRTVIQWDKD DLDAVGLLKV DVLALGMLSA IRRCFDLIEH YRGTRWTIAT LPAEDKPTYE 610 620 630 640 650 660 MISRADTIGV FQIESRAQMA MLPRLRPKTF YDLVIQVAIV RPGPIQGDMV HPYLRRRNKE 670 680 690 700 710 720 EEVDYPSEEL KPVFERTLGV PLFQEQVMEL AIVAAEYTPD EADKLRRAMA AWKRHGSLEP 730 740 750 760 770 780 HRVRLTERML AKGYQPDFIA RIFEQIKGFG SYGFPESHAA SFALLTYASC WLKRHEPAAF 790 800 810 820 830 840 ACALINSWPM GFYNPDQILQ DARRHRLEIR PVDVRHSGWD CSLEPSRQAQ PAIRLGLRMV 850 860 870 880 890 900 RGFREADAQR IEAARQRQPF TDIHDLCLRA ELEPRAREQL ADAGALRGLA GHRHRARWAV 910 920 930 940 950 960 AGIEPQLPLF ASLPAPEETS INLPLPSVGE DLFNDYATLG TTLGPHPLLL LRDELKARRC 970 980 990 1000 1010 1020 RSSRELGTIE HGRPVSVAGL VIGRQRPQTA SGVIFVTLED EFGMVNVVVW RDLAERQRRP 1030 1040 1050 1060 LLQSQLLRVD GHLESASGVR HLIAGRLSDL TPLLTGLDVR SRDFQ

References

[1]

"Complete genome sequence of the metabolically versatile and root-associated nitrogen-fixing bacterium Pseudomonas stutzeri A1501." Yan Y., Yang J., Dou Y., Ping S., Chen M., Yao Z., Li H., Lu W., Zhang W., Peng J., Liu W., He S., Geng L., Zhang X., Yang F., Li D., Lin Z., Wang Y. , Elmerich C., Lin M., Jin Q. Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000304 Genomic DNA. Translation: ABP80002.1.
RefSeq	YP_001172844.1. NC_009434.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A4VM01.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5098427.
GenomeReviews	Gene locus PST_2347 in contig CP000304_GR.
KEGG	psa:PST_2347.
PATRIC	19965190. VBIPseStu31643_2354.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0587.
HOGENOM	HBG734490.
OMA	ADYCANG.
ProtClustDB	PRK05672.
Enzyme and pathway databases
BioCyc	PSTU379731:PST_2347-MONOMER.
Family and domain databases
HAMAP	MF_01902. DNApol_error_prone. [Tree]
InterPro	IPR011708. DNA_pol3_alpha. IPR023073. DNA_pol_error_prone. IPR004365. NA-bd_OB_tRNA-helicase. IPR004013. PHP_C. IPR003141. Pol/His_phosphatase_N. IPR016195. Pol/histidinol_Pase-like. IPR004805. PolC_alpha. [Graphical view]
KO	K14162.
Pfam	PF07733. DNA_pol3_alpha. 1 hit. PF02811. PHP. 1 hit. PF01336. tRNA_anti. 1 hit. [Graphical view]
SMART	SM00481. POLIIIAc. 1 hit. [Graphical view]
SUPFAM	SSF89550. PHP-like. 1 hit.
TIGRFAMs	TIGR00594. Polc. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A4VM01_PSEU5

Accession

Primary (citable) accession number: A4VM01

Entry history

Integrated into UniProtKB/TrEMBL:	May 29, 2007
Last sequence update:	May 29, 2007
Last modified:	December 14, 2011
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)