A4VJR9 (GLND_PSEU5) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
[Protein-PII] uridylyltransferase
Short name=PII uridylyl-transferase
EC=2.7.7.59

Alternative name(s):
UTase
Uridylyl-removing enzyme

Gene names

Name:	glnD
Ordered Locus Names:	PST_1535

Organism

Pseudomonas stutzeri (strain A1501) [Complete proteome] [HAMAP]

Taxonomic identifier

379731 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas stutzeri group › Pseudomonas stutzeri subgroup › Pseudomonas stutzeri

Protein attributes

Sequence length	900 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Modifies, by uridylylation or deuridylylation the PII (GlnB) regulatory protein By similarity. HAMAP-Rule MF_00277
Catalytic activity	UTP + [protein-PII] = diphosphate + uridylyl-[protein-PII]. HAMAP-Rule MF_00277
Sequence similarities	Belongs to the GlnD family.

Ontologies

Keywords
Biological process	Nitrogen fixation
Molecular function	Nucleotidyltransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	nitrogen fixation Inferred from electronic annotation. Source: HAMAP
Molecular_function	[protein-PII] uridylyltransferase activity Inferred from electronic annotation. Source: HAMAP amino acid binding Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: InterPro phosphoric diester hydrolase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 900	900	[Protein-PII] uridylyltransferase HAMAP-Rule MF_00277		PRO_1000078809

Sequences

	Sequence		Length	Mass (Da)
	A4VJR9 [UniParc]. Last modified May 29, 2007. Version 1. Checksum: 71172F92D9FFEF11	FASTA	900	102,974
	10 20 30 40 50 60 MPQVDPELFD RSQFQAELAL KASPIAAYKK AIRQARQVLD ERFRAGRDIR RLIEDRAWFV 70 80 90 100 110 120 DQILRSAWSR FDWDKGADIA LVAVGGYGRG ELHPYSDIDL LILLDENDQE IFREPIEGFL 130 140 150 160 170 180 TLLWDIGLEV GQAVRSVAEC ADEARADLTV ITNLMESRTI AGPERLRQAM LQVTSTQQMW 190 200 210 220 230 240 PSKEFFLAKR NEQRARHAKY NNTEYNLEPN VKGSPGGLRD IQTILWIARR EFGTLNLQAM 250 260 270 280 290 300 VDQGFITEGE HSLLTAAQEF LWKVRYGLHM LAGRAEDRLL FDHQRSLAAL LGYEDSDAKL 310 320 330 340 350 360 AIERFMQKYY RVVMSIAELS DLVGQHFAEV ILWEGESGPI VPLNSRFQVR DGYLEVSNPA 370 380 390 400 410 420 IFKRTPFAIL ETFVLLAQHP DIQGVRSDTI RLLRDHRYLI DDTFRQDLRN TSLFIELFKC 430 440 450 460 470 480 KEGIHRNLRR MNRYGILGRY LPEFGHIVGQ MQHDLFHIYT VDAHTLNVIK YLRKLTKPGV 490 500 510 520 530 540 AEKYPLASKL VEKLPKPELI YIAGLYHDIA KGRGGDHSEL GAVDAEQFCR RHKLPAWDTR 550 560 570 580 590 600 LVVWLVENHL VMSTTAQRKD LSDPQVINDF AQRVGDETHL DYLYVLTVAD INATNPTLWN 610 620 630 640 650 660 SWRASLLRQL YTETKRALKR GLENPLGREE QIRQTQRAAL DDLVRHGTDP DDAEQLWAQL 670 680 690 700 710 720 GDDYFLRHTA TDVAWHTDAI IEHPANGGPL VLIKETTQRE FEGGTQIFIY APDQHDFFAV 730 740 750 760 770 780 TVAAMDQLNL NIHDARILTS SSQFTLDTYI VLEADGSPIG NNPERIEEIR SGLIAALRNP 790 800 810 820 830 840 DDYLTIIQRR VPRQLKHFAF PPQVTIHNDT QRPQTILEII APDRPGLLAR VGQLFLDFDL 850 860 870 880 890 900 SVQNAKIATL GERVEDVFFV TDADNQPLSD PQLCLRLQQA IIKELQQENE QQPSPSSIVI

References

[1]

"Complete genome sequence of the metabolically versatile and root-associated nitrogen-fixing bacterium Pseudomonas stutzeri A1501." Yan Y., Yang J., Dou Y., Ping S., Chen M., Yao Z., Li H., Lu W., Zhang W., Peng J., Liu W., He S., Geng L., Zhang X., Yang F., Li D., Lin Z., Wang Y. , Elmerich C., Lin M., Jin Q. Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: A1501.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000304 Genomic DNA. Translation: ABP79220.1.
RefSeq	YP_001172062.1. NC_009434.1.
3D structure databases
ProteinModelPortal	A4VJR9.
ModBase	Search...
Protein-protein interaction databases
STRING	379731.PST_1535.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABP79220; ABP79220; PST_1535.
GeneID	5097620.
KEGG	psa:PST_1535.
PATRIC	19963513. VBIPseStu31643_1536.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2844.
HOGENOM	HOG000261778.
KO	K00990.
OMA	SPKVWNA.
ProtClustDB	PRK00275.
Enzyme and pathway databases
BioCyc	PSTU379731:GJER-1534-MONOMER.
Family and domain databases
Gene3D	1.10.3210.10. 1 hit.
HAMAP	MF_00277. PII_uridylyl-transf.
InterPro	IPR002912. ACT_dom. IPR010043. GlnD_Uridyltrans. IPR003607. HD/PDEase_dom. IPR006674. HD_domain. IPR002934. Nucleotidyltransferase. IPR013546. PII_UdlTrfase/GS_AdlTrfase. [Graphical view]
PANTHER	PTHR13734:SF1. PTHR13734:SF1. 1 hit.
Pfam	PF01842. ACT. 1 hit. PF08335. GlnD_UR_UTase. 1 hit. PF01966. HD. 1 hit. PF01909. NTP_transf_2. 1 hit. [Graphical view]
PIRSF	PIRSF006288. PII_uridyltransf. 1 hit.
SMART	SM00471. HDc. 1 hit. [Graphical view]
TIGRFAMs	TIGR01693. UTase_glnD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

GLND_PSEU5

Accession

Primary (citable) accession number: A4VJR9

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 20, 2008
Last sequence update:	May 29, 2007
Last modified:	May 1, 2013
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program