A4VIQ4 (A4VIQ4_PSEU5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Exodeoxyribonuclease I EMBL ABP78855.1

Gene names

Name:	sbcB EMBL ABP78855.1
Ordered Locus Names:	PST_1160 EMBL ABP78855.1

Organism

Pseudomonas stutzeri (strain A1501) [Complete proteome] [HAMAP] EMBL ABP78855.1

Taxonomic identifier

379731 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas stutzeri group › Pseudomonas stutzeri subgroup › Pseudomonas stutzeri

Protein attributes

Sequence length	477 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	exodeoxyribonuclease I activity Inferred from electronic annotation. Source: InterPro nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A4VIQ4 [UniParc]. Last modified May 29, 2007. Version 1. Checksum: 90E24359D75C1919	FASTA	477	55,075
	10 20 30 40 50 60 MTPSIFWYDF ETTGISPSRD RPLQVAGIRT NEALEEIGEP LNIYCRPGDD ILPHPAACLV 70 80 90 100 110 120 TGITPAVLQQ KGMCEAQFVH HLHRELSTPG TCGAGYNSLR FDDEVTRYSL YRNFYDPYAR 130 140 150 160 170 180 EWQGGNSRWD LIDLVRTAYA LRPEGIGWPE DDGRVTLKLE RLSAANGLEH LNAHDALSDV 190 200 210 220 230 240 RATISLARLI RERQPRLYEY LFNLRRKHAV LEQVTLLEPL VHVSGRFSAA RHFLSVVLPL 250 260 270 280 290 300 AWHPRNRNAL IVCDLQAEVR PLWLESAETL RQRLYTRRDE LAEGELPVPL KLVHINKCPV 310 320 330 340 350 360 LAPLKVLREA DIQRLELDLP ACHERADALR EQRHVWSPKL DEVYREEGFI GVDDPEQQLY 370 380 390 400 410 420 DGFLGERDRR LCDRIREMAP AELARQQCHF DDVRLEELLF RYRARNFPEA LSAVERVRWQ 430 440 450 460 470 RFCQQRLSGE IAGAPNTLAQ FEADIQQFML TAAPAQQQLL QQWREYGRAL GERYGCN

References

[1]

"Complete genome sequence of the metabolically versatile and root-associated nitrogen-fixing bacterium Pseudomonas stutzeri A1501." Yan Y., Yang J., Dou Y., Ping S., Chen M., Yao Z., Li H., Lu W., Zhang W., Peng J., Liu W., He S., Geng L., Zhang X., Yang F., Li D., Lin Z., Wang Y. , Elmerich C., Lin M., Jin Q. Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: A1501.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000304 Genomic DNA. Translation: ABP78855.1.
RefSeq	YP_001171697.1. NC_009434.1.
3D structure databases
ProteinModelPortal	A4VIQ4.
ModBase	Search...
Protein-protein interaction databases
STRING	379731.PST_1160.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABP78855; ABP78855; PST_1160.
GeneID	5097246.
KEGG	psa:PST_1160.
PATRIC	19962745. VBIPseStu31643_1159.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2925.
HOGENOM	HOG000276591.
KO	K01141.
OMA	PYAREWQ.
ProtClustDB	PRK11779.
Enzyme and pathway databases
BioCyc	PSTU379731:GJER-1160-MONOMER.
Family and domain databases
InterPro	IPR023607. Exodeoxyribonuclease_I. IPR013620. Exonuc_X-T_C. IPR013520. Exonuclease_RNaseT/DNA_pol3. IPR012337. RNaseH-like_dom. [Graphical view]
Pfam	PF08411. Exonuc_X-T_C. 1 hit. PF00929. RNase_T. 1 hit. [Graphical view]
PIRSF	PIRSF000977. Exodeoxyribonuclease_I. 1 hit.
SUPFAM	SSF53098. RNaseH_fold. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A4VIQ4_PSEU5

Accession

Primary (citable) accession number: A4VIQ4

Entry history

Integrated into UniProtKB/TrEMBL:	May 29, 2007
Last sequence update:	May 29, 2007
Last modified:	May 1, 2013
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)