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Protein

Putative thymidine phosphorylase

Gene

PST_0860

Organism
Pseudomonas stutzeri (strain A1501)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

Thymidine + phosphate = thymine + 2-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosyltransferase, Transferase

Enzyme and pathway databases

BioCyciPSTU379731:G1G6D-897-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Putative thymidine phosphorylaseUniRule annotation (EC:2.4.2.4UniRule annotation)
Alternative name(s):
TdRPaseUniRule annotation
Gene namesi
Ordered Locus Names:PST_0860
OrganismiPseudomonas stutzeri (strain A1501)
Taxonomic identifieri379731 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000000233 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003147071 – 526Putative thymidine phosphorylaseAdd BLAST526

Proteomic databases

PRIDEiA4VHV6

Interactioni

Protein-protein interaction databases

STRINGi379731.PST_0860

Structurei

3D structure databases

ProteinModelPortaliA4VHV6
SMRiA4VHV6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CMW Bacteria
COG0213 LUCA
HOGENOMiHOG000252767
KOiK00758
OrthoDBiPOG091H02BC

Family and domain databases

Gene3Di3.40.1030.10, 2 hits
3.90.1170.30, 1 hit
HAMAPiMF_00703 Thymid_phosp_2, 1 hit
InterProiView protein in InterPro
IPR000312 Glycosyl_Trfase_fam3
IPR017459 Glycosyl_Trfase_fam3_N_dom
IPR036320 Glycosyl_Trfase_fam3_N_dom)sf
IPR035902 Nuc_phospho_transferase
IPR036566 PYNP-like_C_sf
IPR013102 PYNP_C
IPR017872 Pyrmidine_PPase_CS
IPR028579 Thym_Pase_Put
IPR013466 Thymidine/AMP_Pase
IPR000053 Thymidine/pyrmidine_PPase
PANTHERiPTHR10515 PTHR10515, 1 hit
PfamiView protein in Pfam
PF02885 Glycos_trans_3N, 1 hit
PF00591 Glycos_transf_3, 1 hit
PF07831 PYNP_C, 1 hit
PIRSFiPIRSF000478 TP_PyNP, 1 hit
SMARTiView protein in SMART
SM00941 PYNP_C, 1 hit
SUPFAMiSSF47648 SSF47648, 1 hit
SSF52418 SSF52418, 1 hit
SSF54680 SSF54680, 1 hit
TIGRFAMsiTIGR02645 ARCH_P_rylase, 1 hit
PROSITEiView protein in PROSITE
PS00647 THYMID_PHOSPHORYLASE, 1 hit

Sequencei

Sequence statusi: Complete.

A4VHV6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTSISSDTPL NGKAPVHLAL RRVAIDTYRE NVAYLHRDCA ACRAEGFQAL
60 70 80 90 100
AKVEIRVNGR RILASLNLVD DPSIVGCDEL GLSEDAFAQL GAEAGVPAAI
110 120 130 140 150
AQAEPAASIP ALHRKIAGER LNRDDFLAIM RDIAEHRYSK IELTAFVVAC
160 170 180 190 200
NQGELDREEV FFLTDAMIRV GRRLDWREHP VVDKHCIGGI PGNRTSMLVV
210 220 230 240 250
PIVAAHGMLC PKTSSRAITS PAGTADTMEV LANVELPFER LCEMVREERG
260 270 280 290 300
CLAWGGSSDL SPADDVLIAV ERPLSIDSPG QMVASILSKK IAAGSTHLLL
310 320 330 340 350
DIPIGPTAKV RSMAEAQRLR KLFEFVATRL GLTLDVVITD GRQPIGNGIG
360 370 380 390 400
PVLEARDVIQ VLQNDPAAPI DLRQKALRLA GRMLEFDPDV RGGDGYAIAR
410 420 430 440 450
DILDSGRALK KMRSIIAAQG GKPFDHNHPP LARLSFDVLA DCDAVVTGID
460 470 480 490 500
NLQLARIARL AGAPKVQGAG VDILRKLGEP VRAGDCLYRV YADFPADLAF
510 520
ARQATERASG VSLGSPEQVP TVFVEF
Length:526
Mass (Da):56,665
Last modified:January 15, 2008 - v2
Checksum:i8919244A6B4B3662
GO

Sequence cautioni

The sequence ABP78557 differs from that shown. Reason: Erroneous initiation.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000304 Genomic DNA Translation: ABP78557.1 Different initiation.
RefSeqiWP_041755366.1, NC_009434.1

Genome annotation databases

EnsemblBacteriaiABP78557; ABP78557; PST_0860
KEGGipsa:PST_0860

Similar proteinsi

Entry informationi

Entry nameiTYPH_PSEU5
AccessioniPrimary (citable) accession number: A4VHV6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: January 15, 2008
Last modified: March 28, 2018
This is version 66 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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