A4V7V3 (A4V7V3_PSEFS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative phage DNA ligase EMBL CAM96439.1
EC=6.5.1.1 EMBL CAM96439.1

Gene names

Ordered Locus Names:

pQBR0407 EMBL CAM96439.1

Encoded on

Plasmid pQBR103 EMBL CAM96439.1

Organism

Pseudomonas fluorescens (strain SBW25) [Complete proteome] [HAMAP] EMBL CAM96439.1

Taxonomic identifier

216595 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas fluorescens group › Pseudomonas fluorescens

Protein attributes

Sequence length	457 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL CAM96439.1
Technical term	Complete proteome Plasmid EMBL CAM96439.1
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A4V7V3 [UniParc]. Last modified May 29, 2007. Version 1. Checksum: 7110A85AF22BD92F	FASTA	457	50,513
	10 20 30 40 50 60 MNSCEILRAL DTVAAVSGKL EKSALLTTYM VDPTFQRVMK LMLNPLISFY KRPARSEVFG 70 80 90 100 110 120 TEVFTDDTWL MLDRLATRQL SGDAASREVQ SALSTLTPES SELLWRVLHR DPRAGFSEGS 130 140 150 160 170 180 INKILPLTIP EVPYMRCSLP SDVDLESWPW ARGIYLQEKA DGTFFALTVK NGGVTVISRS 190 200 210 220 230 240 GFEWPLELYG ELGEVFASWP DGQYHGEMLV EKDGAILPRE IGNGMLTSVN KGTPFQAGCV 250 260 270 280 290 300 PVPYLWDVVP LESLTRRGSC LTPYSERFSQ VGKVVEDLGG GKVRLIHTQV VYSLDEAYAA 310 320 330 340 350 360 SGVHIRNGKE GAVIKHPDGP WRDTGSSGSP FSVKIKMEAP AELRVKGLSK GKGKNAKTFG 370 380 390 400 410 420 ALECVSECGM LEVNISGFSD ELRLEIFNNP ERYIDSIIKV TFNDVTKPNK KTNLYSLFLP 430 440 450 RFGELRPDRT TADTVERIIQ QLEDAKATIG MIESVAA

References

[1]

"Sequence-based analysis of pQBR103; a representative of a unique, transfer-proficient mega plasmid resident in the microbial community of sugar beet." Tett A., Spiers A.J., Crossman L.C., Ager D., Ciric L., Dow J.M., Fry J., Harris D., Lilley A., Parkhill J., Quail M.A., Rainey P.B., Saunders N.J., Seeger K., Snyder L.A.S., Squares R., Thomas C., Turner S.L. , Zhang X-X., Field D., Bailey M.J. ISME J. 1:331-340(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: SBW25 EMBL CAM96439.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM235768 Genomic DNA. Translation: CAM96439.1.
RefSeq	YP_001202153.1. NC_009444.1.
3D structure databases
ProteinModelPortal	A4V7V3.
ModBase	Search...
Protein-protein interaction databases
STRING	216595.pQBR0407.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5122089.
KEGG	pfs:pQBR0407.
PATRIC	19894139. VBIPseFlu98510_0209.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG147398.
HOGENOM	HOG000236947.
KO	K01971.
OMA	YMRCSLP.
ProtClustDB	CLSK852280.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A4V7V3_PSEFS

Accession

Primary (citable) accession number: A4V7V3

Entry history

Integrated into UniProtKB/TrEMBL:	May 29, 2007
Last sequence update:	May 29, 2007
Last modified:	May 1, 2013
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)