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A4TP06 (A4TP06_YERPP) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Penicillin-binding protein 5 EMBL ABP41018.1
EC=3.4.16.4 EMBL ABP41018.1
Gene names
Ordered Locus Names:YPDSF_2652 EMBL ABP41018.1
OrganismYersinia pestis (strain Pestoides F) [Complete proteome] [HAMAP] EMBL ABP41018.1
Taxonomic identifier386656 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Yersinia ›

Protein attributes

Sequence length400 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the peptidase S11 family. RuleBase RU004016

Ontologies

Keywords
   DomainSignal EMBL ABP41018.1
   Molecular functionCarboxypeptidase EMBL ABP41018.1
Hydrolase
Protease
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processproteolysis

Inferred from electronic annotation. Source: InterPro

   Molecular_functionserine-type D-Ala-D-Ala carboxypeptidase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2727 Potential EMBL ABP41018.1
Chain28 – 400373 Potential
PRO_5000236942

Sequences

Sequence LengthMass (Da)Tools
A4TP06 [UniParc].

Last modified May 15, 2007. Version 1.
Checksum: FB59CF7353C71082

FASTA40044,089
        10         20         30         40         50         60 
MKYVITSRII KSLALGTVIV MSAANADDVN LKTMIPGVPQ IDAEAYILID YNSGKVLAEM 

        70         80         90        100        110        120 
NADTRRNPAS LTKMMTSYVI GQAIKSGKIG AEDMVTVGKD AWATGNPEFK GSSLMFLKPG 

       130        140        150        160        170        180 
DRVPVSKLTR GINLQSGNDA CVAMADYVAG SQDSFVNLMN NYVKALGLQN THFKTVHGLD 

       190        200        210        220        230        240 
AEGQFSSARD MALIGQALIR DVPDEYAIYK EKEFTFNNIR QTNRNGLLWD TSLNVDGIKT 

       250        260        270        280        290        300 
GHTEAAGYNL VASATDGQMR LISVVLGGHT FKGRETESKK LLTWGFRFFE TVAPLKVGKE 

       310        320        330        340        350        360 
FASEPVWFGD SDRVQLGVDK DAYLTIPRGR MKDLKASYVL NTPEIHAPLA KNQVVGTINF 

       370        380        390        400 
QLDGKTIDQR PLVVMNEVKE GGFFSRMVDY IKLMFHRWFG

« Hide

References

[1]"Complete sequence of chromosome of Yersinia pestis Pestoides F."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Di Bartolo G., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F. expand/collapse author list , Land M., Hauser L., Worsham P., Chu M., Bearden S., Garcia E., Richardson P.
Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Pestoides F EMBL ABP41018.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000668 Genomic DNA. Translation: ABP41018.1.
RefSeqYP_001163991.1. NC_009381.1.

3D structure databases

ProteinModelPortalA4TP06.
ModBaseSearch...

Protein-protein interaction databases

STRING386656.YPDSF_2652.

Protein family/group databases

MEROPSS11.008.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABP41018; ABP41018; YPDSF_2652.
GeneID5063358.
KEGGypp:YPDSF_2652.
PATRIC18614982. VBIYerPes122972_3376.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1686.
HOGENOMHOG000086623.
KOK07258.
OMAKTMIPAV.
ProtClustDBPRK10793.

Family and domain databases

Gene3D2.60.410.10. 1 hit.
3.40.710.10. 1 hit.
InterProIPR012338. Beta-lactam/transpept-like.
IPR015956. Peniciliin-bd_prot-assoc.
IPR018044. Peptidase_S11.
IPR012907. Peptidase_S11_C.
IPR001967. Peptidase_S11_N.
[Graphical view]
PfamPF07943. PBP5_C. 1 hit.
PF00768. Peptidase_S11. 1 hit.
[Graphical view]
PRINTSPR00725. DADACBPTASE1.
SMARTSM00936. PBP5_C. 1 hit.
[Graphical view]
SUPFAMSSF56601. PBP_transp_fold. 1 hit.
SSF69189. Peniciliin-bd_prot-assoc. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA4TP06_YERPP
AccessionPrimary (citable) accession number: A4TP06
Entry history
Integrated into UniProtKB/TrEMBL: May 15, 2007
Last sequence update: May 15, 2007
Last modified: May 1, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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