A4TM20 (A4TM20_YERPP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Gluconate 5-dehydrogenase EMBL ABP40332.1

Gene names

Ordered Locus Names:

YPDSF_1949

Organism

Yersinia pestis (strain Pestoides F) [Complete proteome] [HAMAP]

Taxonomic identifier

386656 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Yersinia

Protein attributes

Sequence length	289 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	nucleotide binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A4TM20 [UniParc]. Last modified May 15, 2007. Version 1. Checksum: 81118611F2703A29	FASTA	289	31,932
	10 20 30 40 50 60 MDVFTASLRS ACSLRRGHFV NSLIIFIYYR YQEVTMKNLF SLENRKVLIT GSAQGIGFLL 70 80 90 100 110 120 AKGLAEFGAE IIINDITAER AEKAVAELRA SGFIAHAAAF NVTNHDEVNE AIEKIESHIG 130 140 150 160 170 180 AIDVLINNAG IQRRHAFTEF PEKDWDDVIA VNQKSVFLVS QAVARYMVKR QRGKIINICS 190 200 210 220 230 240 MQSELGRDTI TPYAASKGAV KMLTRGMCVE LARYNIQVNG IAPGYFKTDM TKALVDDQAF 250 260 270 280 TDWLCKRTPA ARWGDPEELI GAAVYLSSKA SDFVNGHLLF VDGGMLVAV

References

[1]

"Complete sequence of chromosome of Yersinia pestis Pestoides F." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Di Bartolo G., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F. , Land M., Hauser L., Worsham P., Chu M., Bearden S., Garcia E., Richardson P. Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Pestoides F.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000668 Genomic DNA. Translation: ABP40332.1.
RefSeq	YP_001163305.1. NC_009381.1.
3D structure databases
ProteinModelPortal	A4TM20.
ModBase	Search...
Protein-protein interaction databases
STRING	A4TM20.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5064400.
GenomeReviews	Gene locus YPDSF_1949 in contig CP000668_GR.
KEGG	ypp:YPDSF_1949.
PATRIC	18613280. VBIYerPes122972_2542.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1028.
HOGENOM	HBG750976.
OMA	RYMIKRQ.
ProtClustDB	PRK08085.
Enzyme and pathway databases
BioCyc	YPES386656:YPDSF_1949-MONOMER.
Family and domain databases
InterPro	IPR002198. DH_sc/Rdtase_SDR. IPR002347. Glc/ribitol_DH. IPR016040. NAD(P)-bd_dom. IPR020904. Sc_DH/Rdtase_CS. [Graphical view]
Gene3D	G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KO	K00046.
Pfam	PF00106. adh_short. 1 hit. [Graphical view]
PRINTS	PR00081. GDHRDH. PR00080. SDRFAMILY.
PROSITE	PS00061. ADH_SHORT. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A4TM20_YERPP

Accession

Primary (citable) accession number: A4TM20

Entry history

Integrated into UniProtKB/TrEMBL:	May 15, 2007
Last sequence update:	May 15, 2007
Last modified:	January 25, 2012
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)