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Protein

Ribosomal RNA large subunit methyltransferase G

Gene

rlmG

Organism
Yersinia pestis (strain Pestoides F)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA.UniRule annotation

Catalytic activityi

S-adenosyl-L-methionine + guanine(1835) in 23S rRNA = S-adenosyl-L-homocysteine + N(2)-methylguanine(1835) in 23S rRNA.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Methyltransferase, Transferase

Keywords - Biological processi

rRNA processing

Keywords - Ligandi

S-adenosyl-L-methionine

Enzyme and pathway databases

BioCyciYPES386656:GKD7-383-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal RNA large subunit methyltransferase GUniRule annotation (EC:2.1.1.174UniRule annotation)
Alternative name(s):
23S rRNA m2G1835 methyltransferaseUniRule annotation
rRNA (guanine-N(2)-)-methyltransferase RlmGUniRule annotation
Gene namesi
Name:rlmGUniRule annotation
Ordered Locus Names:YPDSF_0375
OrganismiYersinia pestis (strain Pestoides F)
Taxonomic identifieri386656 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 395395Ribosomal RNA large subunit methyltransferase GPRO_0000366540Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliA4THM8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the methyltransferase superfamily. RlmG family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000246323.
KOiK00564.
OMAiFHQQQVV.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_01859. 23SrRNA_methyltr_G. 1 hit.
InterProiIPR002052. DNA_methylase_N6_adenine_CS.
IPR017237. rRNA_m2G-MeTrfase_RsmD.
IPR029063. SAM-dependent_MTases.
IPR007848. Small_mtfrase_dom.
[Graphical view]
PfamiPF05175. MTS. 1 hit.
[Graphical view]
PIRSFiPIRSF037565. RRNA_m2G_Mtase_RsmD_prd. 1 hit.
SUPFAMiSSF53335. SSF53335. 1 hit.

Sequencei

Sequence statusi: Complete.

A4THM8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSQLDLGTQS LELERFPPQE NSNTLQAWEA ADEYLLQNID LSKIDGRPVL
60 70 80 90 100
VFNDQFGTLA CALHAYRPFS SSDSYMSQLA TAHNLRLNHL DESAVTLLSS
110 120 130 140 150
VDDLPEAPKL VVIKIPKALA LLEHQLRALR RVVAPDTVII AGAKSRDVHN
160 170 180 190 200
STLQLFEKIL GPTKTTLAWK KARLIHCEVA DIPLADAPET IDWPLPNTDY
210 220 230 240 250
IIHNHANVFS RNNLDIGARF FMEILPYDVT GKIADLGCGN GVVGLIALEQ
260 270 280 290 300
NPLAEMLFVD ESYMAVASSE LNITVNRPQD LSRCEFMVSH GLAGVERESL
310 320 330 340 350
QLVLCNPPFH QQHAVSDHVA WQMFCDAKRC LKAGGELMIV GNRHLDYFHK
360 370 380 390
LKRLFGNCET LDSNQKFMVL KSVKQASSRS EGGGSGSLDM SYSDF
Length:395
Mass (Da):43,841
Last modified:May 15, 2007 - v1
Checksum:i408368C7D2B4D29D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000668 Genomic DNA. Translation: ABP38790.1.
RefSeqiWP_011906152.1. NZ_CP009715.1.

Genome annotation databases

EnsemblBacteriaiABP38790; ABP38790; YPDSF_0375.
KEGGiypp:YPDSF_0375.
PATRICi18609542. VBIYerPes122972_0696.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000668 Genomic DNA. Translation: ABP38790.1.
RefSeqiWP_011906152.1. NZ_CP009715.1.

3D structure databases

ProteinModelPortaliA4THM8.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABP38790; ABP38790; YPDSF_0375.
KEGGiypp:YPDSF_0375.
PATRICi18609542. VBIYerPes122972_0696.

Phylogenomic databases

HOGENOMiHOG000246323.
KOiK00564.
OMAiFHQQQVV.

Enzyme and pathway databases

BioCyciYPES386656:GKD7-383-MONOMER.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_01859. 23SrRNA_methyltr_G. 1 hit.
InterProiIPR002052. DNA_methylase_N6_adenine_CS.
IPR017237. rRNA_m2G-MeTrfase_RsmD.
IPR029063. SAM-dependent_MTases.
IPR007848. Small_mtfrase_dom.
[Graphical view]
PfamiPF05175. MTS. 1 hit.
[Graphical view]
PIRSFiPIRSF037565. RRNA_m2G_Mtase_RsmD_prd. 1 hit.
SUPFAMiSSF53335. SSF53335. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRLMG_YERPP
AccessioniPrimary (citable) accession number: A4THM8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 24, 2009
Last sequence update: May 15, 2007
Last modified: September 7, 2016
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.