Skip Header

Contribute Send feedback
Read comments (?) or add your own

A4TEM3 (A4TEM3_MYCGI) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Protein attributes

Sequence length383 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622 RuleBase RU004247

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
   LigandPyridoxal phosphate SAAS SAAS020622 RuleBase RU000608
   Molecular functionIsomerase RuleBase RU000608 SAAS SAAS020622 EMBL ABP47400.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processD-alanine biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Molecular_functionalanine racemase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A4TEM3 [UniParc].

Last modified May 15, 2007. Version 1.
Checksum: 522D6B10CCC7622C

FASTA38340,187
        10         20         30         40         50         60 
MTTTENRLMN TPSAVIDLDA IAHNVGVLRD RAGRAAVMAV VKADGYGHGA TAVARAALAA 

        70         80         90        100        110        120 
GATNLGVATL DEALSLRRDG VTAPVLSWLH PPGTDFTPAV QADIEVALSS RRQLDDLLRA 

       130        140        150        160        170        180 
VARTGRTATV TVKADTGLSR NGVSPADHPG LVSALARAQT DGAVTVHGLM SHLAHGDVPD 

       190        200        210        220        230        240 
HPFNDEQARR LTEMASEARS AGVAYDVVHL CNSPAALTRP DLAFDMVRPG IAVYGQTPIP 

       250        260        270        280        290        300 
ERGDMGLRPA MTVKCPVALV RSVRAGDGVS YGHTWLAPRD TTLALIPAGY ADGVFRALSN 

       310        320        330        340        350        360 
RFEVTINGRR YPNVGRVCMD QFVVDLGPGP VDVAEGDDAI LFGPGDDGEP TAQDWADLLG 

       370        380 
TINYEVVTSP RGRIVRGYVG GAQ

« Hide

References

[1]"Complete sequence of chromosome of Mycobacterium gilvum PYR-GCK."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Miller C., Richardson P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PYR-GCK EMBL ABP47400.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000656 Genomic DNA. Translation: ABP47400.1.
RefSeqYP_001136188.1. NC_009338.1.

3D structure databases

ProteinModelPortalA4TEM3.
ModBaseSearch...

Protein-protein interaction databases

STRING350054.Mflv_4934.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABP47400; ABP47400; Mflv_4934.
GeneID4976245.
KEGGmgi:Mflv_4934.
PATRIC18038124. VBIMycGil17082_5028.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0787.
HOGENOMHOG000031444.
KOK01775.
OMANFKSIEI.
ProtClustDBPRK00053.

Enzyme and pathway databases

BioCycMGIL350054:GHK8-5330-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA4TEM3_MYCGI
AccessionPrimary (citable) accession number: A4TEM3
Entry history
Integrated into UniProtKB/TrEMBL: May 15, 2007
Last sequence update: May 15, 2007
Last modified: May 1, 2013
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info